Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:78386412-78736436

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153 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Epfpq4 15 3460212 to 78717086 75256874 QTL epididymal fat percentage QTL 4
Tailq6 15 3460212 to 78717086 75256874 QTL tail length QTL 6
W3q7 15 3460212 to 78717086 75256874 QTL weight 3 weeks QTL 7
Scfq2 15 3460212 to 78717086 75256874 QTL subcutaneous fat pad weight QTL 2
Tailaq4 15 3460212 to 78717086 75256874 QTL tail length adjusted QTL 4
Tex33 15 78378400 to 78395912 17512 - protein coding gene testis expressed 33
Tssr135209 15 78388738 to 78388749 11 - TSS region transcription start site region 135209
Tssr135210 15 78388757 to 78388776 19 - TSS region transcription start site region 135210
Tssr135211 15 78390265 to 78390274 9 - TSS region transcription start site region 135211
Tssr135212 15 78395876 to 78395893 17 - TSS region transcription start site region 135212
Tssr135213 15 78395899 to 78395914 15 - TSS region transcription start site region 135213
Gm49481 15 78396001 to 78397184 1183 + bidirectional promoter lncRNA gene predicted gene, 49481
Tst 15 78399556 to 78405859 6303 - protein coding gene thiosulfate sulfurtransferase, mitochondrial
Tssr135214 15 78405356 to 78405381 25 - TSS region transcription start site region 135214
Cpgi7286 15 78405516 to 78406945 1429 CpG island CpG island 7286
Tssr135215 15 78405824 to 78405917 93 - TSS region transcription start site region 135215
Tssr135216 15 78405985 to 78405993 8 - TSS region transcription start site region 135216
Tssr131943 15 78406183 to 78406187 4 + TSS region transcription start site region 131943
Tssr135217 15 78406410 to 78406416 6 - TSS region transcription start site region 135217
Tssr131944 15 78406695 to 78406732 37 + TSS region transcription start site region 131944
Mpst 15 78406712 to 78414015 7303 + protein coding gene mercaptopyruvate sulfurtransferase
Tssr131945 15 78406777 to 78406796 19 + TSS region transcription start site region 131945
Tssr131946 15 78409713 to 78409728 15 + TSS region transcription start site region 131946
Tssr131947 15 78409739 to 78409748 9 + TSS region transcription start site region 131947
Tssr131948 15 78409760 to 78409776 16 + TSS region transcription start site region 131948
Cpgi7287 15 78409872 to 78410773 901 CpG island CpG island 7287
Tssr131949 15 78409910 to 78409922 12 + TSS region transcription start site region 131949
Tssr131950 15 78409954 to 78410038 84 + TSS region transcription start site region 131950
Tssr131951 15 78410279 to 78410284 5 + TSS region transcription start site region 131951
Gm41355 15 78416889 to 78426230 9341 + lncRNA gene predicted gene, 41355
Gm36644 15 78420496 to 78424193 3697 - lincRNA gene predicted gene, 36644
Cpgi7288 15 78428267 to 78429150 883 CpG island CpG island 7288
Tssr131952 15 78428447 to 78428457 10 + TSS region transcription start site region 131952
Kctd17 15 78428564 to 78439303 10739 + protein coding gene potassium channel tetramerisation domain containing 17
Tssr131953 15 78428625 to 78428636 11 + TSS region transcription start site region 131953
Tssr131954 15 78428650 to 78428671 21 + TSS region transcription start site region 131954
Tssr131955 15 78430117 to 78430127 10 + TSS region transcription start site region 131955
Cpgi7289 15 78436624 to 78437331 707 CpG island CpG island 7289
Tssr131956 15 78437112 to 78437145 33 + TSS region transcription start site region 131956
Tmprss6 15 78439667 to 78468634 28967 - protein coding gene transmembrane serine protease 6
Tssr131957 15 78449380 to 78449386 6 + TSS region transcription start site region 131957
Tssr135218 15 78468449 to 78468460 11 - TSS region transcription start site region 135218
Tssr135219 15 78468463 to 78468485 22 - TSS region transcription start site region 135219
Tssr135220 15 78468620 to 78468646 26 - TSS region transcription start site region 135220
Tssr135221 15 78468658 to 78468681 23 - TSS region transcription start site region 135221
Il2rb 15 78479256 to 78495271 16015 - protein coding gene interleukin 2 receptor, beta chain
Tssr135222 15 78481676 to 78481714 38 - TSS region transcription start site region 135222
Tssr135223 15 78493607 to 78493617 10 - TSS region transcription start site region 135223
Tssr135224 15 78493726 to 78493747 21 - TSS region transcription start site region 135224
Tssr131958 15 78493851 to 78493860 9 + TSS region transcription start site region 131958
Tssr131959 15 78493869 to 78493882 13 + TSS region transcription start site region 131959
Tssr135225 15 78494358 to 78494369 11 - TSS region transcription start site region 135225
Tssr135226 15 78494372 to 78494381 9 - TSS region transcription start site region 135226
Tssr135227 15 78495037 to 78495048 11 - TSS region transcription start site region 135227
Tssr135228 15 78495059 to 78495073 14 - TSS region transcription start site region 135228
Tssr135229 15 78495212 to 78495223 11 - TSS region transcription start site region 135229
Tssr135230 15 78495241 to 78495251 10 - TSS region transcription start site region 135230
Tssr135231 15 78511605 to 78511616 11 - TSS region transcription start site region 135231
Tssr135232 15 78512456 to 78512476 20 - TSS region transcription start site region 135232
C1qtnf6 15 78523346 to 78531416 8070 - protein coding gene C1q and tumor necrosis factor related protein 6
Tssr135233 15 78529559 to 78529570 11 - TSS region transcription start site region 135233
Tssr135234 15 78529580 to 78529605 25 - TSS region transcription start site region 135234
Tssr135235 15 78529609 to 78529612 3 - TSS region transcription start site region 135235
Tssr135236 15 78529617 to 78529636 19 - TSS region transcription start site region 135236
Tssr135237 15 78529642 to 78529661 19 - TSS region transcription start site region 135237
Tssr131960 15 78531087 to 78531116 29 + TSS region transcription start site region 131960
Gm49490 15 78531109 to 78532797 1688 + antisense lncRNA gene predicted gene, 49490
Cpgi7290 15 78531990 to 78532459 469 CpG island CpG island 7290
Sstr3 15 78537008 to 78544685 7677 - protein coding gene somatostatin receptor 3
Cpgi7291 15 78539373 to 78540255 882 CpG island CpG island 7291
Cpgi7292 15 78544228 to 78544417 189 CpG island CpG island 7292
Tssr135238 15 78544643 to 78544658 15 - TSS region transcription start site region 135238
Tssr135239 15 78544666 to 78544686 20 - TSS region transcription start site region 135239
Tssr135240 15 78549352 to 78549384 32 - TSS region transcription start site region 135240
Gm6723 15 78554408 to 78554848 440 - pseudogene predicted pseudogene 6723
Cpgi7293 15 78554495 to 78554983 488 CpG island CpG island 7293
Tssr131961 15 78558836 to 78558841 5 + TSS region transcription start site region 131961
Rac2 15 78559169 to 78572783 13614 - protein coding gene Rac family small GTPase 2
Tssr131962 15 78560873 to 78560885 12 + TSS region transcription start site region 131962
Tssr131963 15 78560988 to 78561019 31 + TSS region transcription start site region 131963
Tssr135241 15 78561001 to 78561048 47 - TSS region transcription start site region 135241
Tssr131964 15 78561198 to 78561227 29 + TSS region transcription start site region 131964
Tssr135242 15 78561202 to 78561214 12 - TSS region transcription start site region 135242
Tssr135243 15 78561224 to 78561233 9 - TSS region transcription start site region 135243
Tssr135244 15 78561403 to 78561417 14 - TSS region transcription start site region 135244
Tssr131965 15 78561412 to 78561436 24 + TSS region transcription start site region 131965
Tssr135245 15 78561465 to 78561490 25 - TSS region transcription start site region 135245
Tssr131966 15 78561912 to 78561952 40 + TSS region transcription start site region 131966
Tssr135246 15 78561946 to 78562000 54 - TSS region transcription start site region 135246
Tssr131967 15 78564908 to 78564968 60 + TSS region transcription start site region 131967
Tssr135247 15 78564985 to 78565030 45 - TSS region transcription start site region 135247
Tssr135248 15 78565944 to 78565957 13 - TSS region transcription start site region 135248
Tssr135249 15 78565963 to 78565981 18 - TSS region transcription start site region 135249
Tssr131968 15 78565978 to 78565996 18 + TSS region transcription start site region 131968
Tssr135250 15 78570774 to 78570806 32 - TSS region transcription start site region 135250
Cpgi7294 15 78571723 to 78572033 310 CpG island CpG island 7294
Tssr131969 15 78571798 to 78571811 13 + TSS region transcription start site region 131969
Tssr135251 15 78572668 to 78572675 7 - TSS region transcription start site region 135251
Tssr135252 15 78572686 to 78572690 4 - TSS region transcription start site region 135252
Tssr135253 15 78572709 to 78572750 41 - TSS region transcription start site region 135253
Tssr135254 15 78572754 to 78572790 36 - TSS region transcription start site region 135254
Tssr135255 15 78573165 to 78573204 39 - TSS region transcription start site region 135255
Tssr135256 15 78573214 to 78573229 15 - TSS region transcription start site region 135256
Gm36738 15 78574411 to 78581616 7205 - lincRNA gene predicted gene, 36738
D15Mit239 15 78576815 to 78576927 112 DNA segment DNA Segment, Chr 15, Massachusetts Institute of Technology 239
Tssr135257 15 78581563 to 78581621 58 - TSS region transcription start site region 135257
Cyth4 15 78597047 to 78622019 24972 + protein coding gene cytohesin 4
Tssr131970 15 78597112 to 78597121 9 + TSS region transcription start site region 131970
Tssr131971 15 78597133 to 78597152 19 + TSS region transcription start site region 131971
Tssr135258 15 78597768 to 78597787 19 - TSS region transcription start site region 135258
Tssr135259 15 78597940 to 78597974 34 - TSS region transcription start site region 135259
Tssr131972 15 78598059 to 78598117 58 + TSS region transcription start site region 131972
Tssr135260 15 78599187 to 78599223 36 - TSS region transcription start site region 135260
Tssr131973 15 78602712 to 78602733 21 + TSS region transcription start site region 131973
Tssr131974 15 78602770 to 78602787 17 + TSS region transcription start site region 131974
Tssr131975 15 78608115 to 78608128 13 + TSS region transcription start site region 131975
Tssr131976 15 78609814 to 78609835 21 + TSS region transcription start site region 131976
Tssr4648 15 78611414 to 78611425 11 + TSS region transcription start site region 4648
Tssr4649 15 78611427 to 78611507 80 + TSS region transcription start site region 4649
Tssr131977 15 78615740 to 78615749 9 + TSS region transcription start site region 131977
Tssr131978 15 78615761 to 78615780 19 + TSS region transcription start site region 131978
Tssr131979 15 78615822 to 78615837 15 + TSS region transcription start site region 131979
Tssr131980 15 78615839 to 78615850 11 + TSS region transcription start site region 131980
Tssr131981 15 78615926 to 78615952 26 + TSS region transcription start site region 131981
Tssr131982 15 78615974 to 78615983 9 + TSS region transcription start site region 131982
Tssr131983 15 78616295 to 78616483 188 + TSS region transcription start site region 131983
Gm36877 15 78638613 to 78645475 6862 - lncRNA gene predicted gene, 36877
Elfn2 15 78667331 to 78718771 51440 - protein coding gene leucine rich repeat and fibronectin type III, extracellular 2
Tssr135261 15 78670477 to 78670480 3 - TSS region transcription start site region 135261
Tssr135262 15 78670513 to 78670535 22 - TSS region transcription start site region 135262
Tssr135263 15 78670539 to 78670545 6 - TSS region transcription start site region 135263
Tssr135264 15 78670548 to 78670549 1 - TSS region transcription start site region 135264
Tssr131984 15 78670630 to 78670650 20 + TSS region transcription start site region 131984
Tssr131985 15 78670670 to 78670680 10 + TSS region transcription start site region 131985
Tssr131986 15 78670782 to 78670802 20 + TSS region transcription start site region 131986
Cpgi7295 15 78672153 to 78672724 571 CpG island CpG island 7295
Tssr135265 15 78673230 to 78673259 29 - TSS region transcription start site region 135265
Tssr135266 15 78673680 to 78673689 9 - TSS region transcription start site region 135266
1700041B01Rik 15 78674687 to 78676124 1437 + antisense lncRNA gene RIKEN cDNA 1700041B01 gene
Tssr131987 15 78687192 to 78687194 2 + TSS region transcription start site region 131987
V25Dq8 15 78700000 to 78700000 0 QTL vitamin D inactive form serum level QTL 8
Tssr135267 15 78710774 to 78710793 19 - TSS region transcription start site region 135267
Tssr135268 15 78710794 to 78710806 12 - TSS region transcription start site region 135268
Cpgi7296 15 78712132 to 78713411 1279 CpG island CpG island 7296
D15Mit1 15 78716903 to 78717086 183 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 1
Cpgi7297 15 78717843 to 78719755 1912 CpG island CpG island 7297
Tssr135269 15 78718462 to 78718510 48 - TSS region transcription start site region 135269
Tssr135270 15 78718515 to 78718555 40 - TSS region transcription start site region 135270
Tssr135271 15 78718556 to 78718577 21 - TSS region transcription start site region 135271
Tssr135272 15 78718845 to 78718879 34 - TSS region transcription start site region 135272
Tssr135273 15 78726748 to 78726764 16 - TSS region transcription start site region 135273
W3q6 15 102993272 to 78716903 -24276369 QTL weight 3 weeks QTL 6
Epfpq3 15 102993272 to 78716903 -24276369 QTL epididymal fat percentage QTL 3