Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:78344380-78554386

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85 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Csf2rb 15 78325798 to 78351001 25203 + protein coding gene colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage)
Tssr131930 15 78344877 to 78344911 34 + TSS region transcription start site region 131930
Tssr131931 15 78345476 to 78345495 19 + TSS region transcription start site region 131931
Tssr131932 15 78348067 to 78348079 12 + TSS region transcription start site region 131932
Tssr131933 15 78348151 to 78348163 12 + TSS region transcription start site region 131933
Tssr131934 15 78348215 to 78348229 14 + TSS region transcription start site region 131934
Tssr131935 15 78348280 to 78348291 11 + TSS region transcription start site region 131935
Mir7676-2 15 78348599 to 78348660 61 + miRNA gene microRNA 7676-2
Tssr131936 15 78348946 to 78348959 13 + TSS region transcription start site region 131936
Tssr131937 15 78348973 to 78348984 11 + TSS region transcription start site region 131937
Tssr131938 15 78349027 to 78349070 43 + TSS region transcription start site region 131938
Tssr131939 15 78349095 to 78349119 24 + TSS region transcription start site region 131939
Tssr131940 15 78349168 to 78349193 25 + TSS region transcription start site region 131940
Tssr131941 15 78349262 to 78349282 20 + TSS region transcription start site region 131941
Tssr131942 15 78349300 to 78349311 11 + TSS region transcription start site region 131942
Gm26329 15 78369248 to 78369357 109 + unclassified non-coding RNA gene predicted gene, 26329
Tex33 15 78378400 to 78395912 17512 - protein coding gene testis expressed 33
Tssr135209 15 78388738 to 78388749 11 - TSS region transcription start site region 135209
Tssr135210 15 78388757 to 78388776 19 - TSS region transcription start site region 135210
Tssr135211 15 78390265 to 78390274 9 - TSS region transcription start site region 135211
Tssr135212 15 78395876 to 78395893 17 - TSS region transcription start site region 135212
Tssr135213 15 78395899 to 78395914 15 - TSS region transcription start site region 135213
Gm49481 15 78396001 to 78397184 1183 + bidirectional promoter lncRNA gene predicted gene, 49481
Tst 15 78399556 to 78405859 6303 - protein coding gene thiosulfate sulfurtransferase, mitochondrial
Tssr135214 15 78405356 to 78405381 25 - TSS region transcription start site region 135214
Cpgi7286 15 78405516 to 78406945 1429 CpG island CpG island 7286
Tssr135215 15 78405824 to 78405917 93 - TSS region transcription start site region 135215
Tssr135216 15 78405985 to 78405993 8 - TSS region transcription start site region 135216
Tssr131943 15 78406183 to 78406187 4 + TSS region transcription start site region 131943
Tssr135217 15 78406410 to 78406416 6 - TSS region transcription start site region 135217
Tssr131944 15 78406695 to 78406732 37 + TSS region transcription start site region 131944
Mpst 15 78406712 to 78414015 7303 + protein coding gene mercaptopyruvate sulfurtransferase
Tssr131945 15 78406777 to 78406796 19 + TSS region transcription start site region 131945
Tssr131946 15 78409713 to 78409728 15 + TSS region transcription start site region 131946
Tssr131947 15 78409739 to 78409748 9 + TSS region transcription start site region 131947
Tssr131948 15 78409760 to 78409776 16 + TSS region transcription start site region 131948
Cpgi7287 15 78409872 to 78410773 901 CpG island CpG island 7287
Tssr131949 15 78409910 to 78409922 12 + TSS region transcription start site region 131949
Tssr131950 15 78409954 to 78410038 84 + TSS region transcription start site region 131950
Tssr131951 15 78410279 to 78410284 5 + TSS region transcription start site region 131951
Gm41355 15 78416889 to 78426230 9341 + lncRNA gene predicted gene, 41355
Gm36644 15 78420496 to 78424193 3697 - lincRNA gene predicted gene, 36644
Cpgi7288 15 78428267 to 78429150 883 CpG island CpG island 7288
Tssr131952 15 78428447 to 78428457 10 + TSS region transcription start site region 131952
Kctd17 15 78428564 to 78439303 10739 + protein coding gene potassium channel tetramerisation domain containing 17
Tssr131953 15 78428625 to 78428636 11 + TSS region transcription start site region 131953
Tssr131954 15 78428650 to 78428671 21 + TSS region transcription start site region 131954
Tssr131955 15 78430117 to 78430127 10 + TSS region transcription start site region 131955
Cpgi7289 15 78436624 to 78437331 707 CpG island CpG island 7289
Tssr131956 15 78437112 to 78437145 33 + TSS region transcription start site region 131956
Tmprss6 15 78439667 to 78468634 28967 - protein coding gene transmembrane serine protease 6
Tssr131957 15 78449380 to 78449386 6 + TSS region transcription start site region 131957
Tssr135218 15 78468449 to 78468460 11 - TSS region transcription start site region 135218
Tssr135219 15 78468463 to 78468485 22 - TSS region transcription start site region 135219
Tssr135220 15 78468620 to 78468646 26 - TSS region transcription start site region 135220
Tssr135221 15 78468658 to 78468681 23 - TSS region transcription start site region 135221
Il2rb 15 78479256 to 78495271 16015 - protein coding gene interleukin 2 receptor, beta chain
Tssr135222 15 78481676 to 78481714 38 - TSS region transcription start site region 135222
Tssr135223 15 78493607 to 78493617 10 - TSS region transcription start site region 135223
Tssr135224 15 78493726 to 78493747 21 - TSS region transcription start site region 135224
Tssr131958 15 78493851 to 78493860 9 + TSS region transcription start site region 131958
Tssr131959 15 78493869 to 78493882 13 + TSS region transcription start site region 131959
Tssr135225 15 78494358 to 78494369 11 - TSS region transcription start site region 135225
Tssr135226 15 78494372 to 78494381 9 - TSS region transcription start site region 135226
Tssr135227 15 78495037 to 78495048 11 - TSS region transcription start site region 135227
Tssr135228 15 78495059 to 78495073 14 - TSS region transcription start site region 135228
Tssr135229 15 78495212 to 78495223 11 - TSS region transcription start site region 135229
Tssr135230 15 78495241 to 78495251 10 - TSS region transcription start site region 135230
Tssr135231 15 78511605 to 78511616 11 - TSS region transcription start site region 135231
Tssr135232 15 78512456 to 78512476 20 - TSS region transcription start site region 135232
C1qtnf6 15 78523346 to 78531416 8070 - protein coding gene C1q and tumor necrosis factor related protein 6
Tssr135233 15 78529559 to 78529570 11 - TSS region transcription start site region 135233
Tssr135234 15 78529580 to 78529605 25 - TSS region transcription start site region 135234
Tssr135235 15 78529609 to 78529612 3 - TSS region transcription start site region 135235
Tssr135236 15 78529617 to 78529636 19 - TSS region transcription start site region 135236
Tssr135237 15 78529642 to 78529661 19 - TSS region transcription start site region 135237
Tssr131960 15 78531087 to 78531116 29 + TSS region transcription start site region 131960
Gm49490 15 78531109 to 78532797 1688 + antisense lncRNA gene predicted gene, 49490
Cpgi7290 15 78531990 to 78532459 469 CpG island CpG island 7290
Sstr3 15 78537008 to 78544685 7677 - protein coding gene somatostatin receptor 3
Cpgi7291 15 78539373 to 78540255 882 CpG island CpG island 7291
Cpgi7292 15 78544228 to 78544417 189 CpG island CpG island 7292
Tssr135238 15 78544643 to 78544658 15 - TSS region transcription start site region 135238
Tssr135239 15 78544666 to 78544686 20 - TSS region transcription start site region 135239
Tssr135240 15 78549352 to 78549384 32 - TSS region transcription start site region 135240