Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:75197406-79287551

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1356 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Scfq2 15 3460212 to 78717086 75256874 QTL subcutaneous fat pad weight QTL 2
W3q7 15 3460212 to 78717086 75256874 QTL weight 3 weeks QTL 7
Tailq6 15 3460212 to 78717086 75256874 QTL tail length QTL 6
Tailaq4 15 3460212 to 78717086 75256874 QTL tail length adjusted QTL 4
Epfpq4 15 3460212 to 78717086 75256874 QTL epididymal fat percentage QTL 4
Dpml 15 51141298 to 76910293 25768995 QTL dopamine loss
Emo2 15 72500610 to 76910293 4409683 QTL emotionality 2
Gm28117 15 75193904 to 75197667 3763 - pseudogene predicted gene 28117
Tssr134839 15 75216165 to 75216180 15 - TSS region transcription start site region 134839
Tssr134840 15 75216187 to 75216198 11 - TSS region transcription start site region 134840
Tssr131653 15 75216244 to 75216254 10 + TSS region transcription start site region 131653
Tssr131654 15 75216354 to 75216392 38 + TSS region transcription start site region 131654
Ly6g2 15 75216376 to 75222661 6285 + protein coding gene lymphocyte antigen 6 complex, locus G2
Tssr131655 15 75216676 to 75216692 16 + TSS region transcription start site region 131655
Tssr131656 15 75222537 to 75222548 11 + TSS region transcription start site region 131656
Gm10238 15 75235597 to 75238768 3171 - pseudogene predicted pseudogene 10238
Tssr134841 15 75239072 to 75239089 17 - TSS region transcription start site region 134841
Gm28115 15 75245146 to 75247357 2211 - pseudogene predicted gene 28115
Tssr131657 15 75268379 to 75268402 23 + TSS region transcription start site region 131657
Ly6f 15 75268421 to 75272235 3814 + protein coding gene lymphocyte antigen 6 complex, locus F
Gm28116 15 75293950 to 75297099 3149 - pseudogene predicted gene 28116
Gm3454 15 75311377 to 75314964 3587 - pseudogene predicted gene 3454
Tssr134842 15 75315245 to 75315272 27 - TSS region transcription start site region 134842
Gm28113 15 75326500 to 75326728 228 - pseudogene predicted gene 28113
Gm29517 15 75328240 to 75330355 2115 + pseudogene predicted gene 29517
Gm28114 15 75349006 to 75351181 2175 - pseudogene predicted gene 28114
Tssr134843 15 75352123 to 75352126 3 - TSS region transcription start site region 134843
Gm3142 15 75372463 to 75377269 4806 - pseudogene predicted gene 3142
9030619P08Rik 15 75427606 to 75431829 4223 - pseudogene RIKEN cDNA 9030619P08 gene
Tssr134844 15 75431745 to 75431774 29 - TSS region transcription start site region 134844
Pain1 15 75448997 to 90928982 15479985 QTL pain 1
Ly6l 15 75449457 to 75451406 1949 + protein coding gene lymphocyte antigen 6 complex, locus L
D15Mit117 15 75474286 to 75474431 145 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 117
Tssr131658 15 75474470 to 75474477 7 + TSS region transcription start site region 131658
Tssr131659 15 75474486 to 75474495 9 + TSS region transcription start site region 131659
Tssr131660 15 75474501 to 75474532 31 + TSS region transcription start site region 131660
Gm34531 15 75474546 to 75476466 1920 + lncRNA gene predicted gene, 34531
Tssr131661 15 75498718 to 75498725 7 + TSS region transcription start site region 131661
Tssr131662 15 75498737 to 75498759 22 + TSS region transcription start site region 131662
Gm34593 15 75498774 to 75500720 1946 + lncRNA gene predicted gene, 34593
Gm34646 15 75517209 to 75519657 2448 + lncRNA gene predicted gene, 34646
Tssr131663 15 75517259 to 75517273 14 + TSS region transcription start site region 131663
Ly6h 15 75564745 to 75567249 2504 - protein coding gene lymphocyte antigen 6 complex, locus H
Cpgi7183 15 75565518 to 75567519 2001 CpG island CpG island 7183
Tssr134845 15 75566264 to 75566276 12 - TSS region transcription start site region 134845
Tssr134846 15 75566310 to 75566354 44 - TSS region transcription start site region 134846
Tssr134847 15 75566552 to 75566567 15 - TSS region transcription start site region 134847
Tssr134848 15 75566568 to 75566604 36 - TSS region transcription start site region 134848
Tssr134849 15 75566608 to 75566658 50 - TSS region transcription start site region 134849
Tssr134850 15 75566811 to 75566896 85 - TSS region transcription start site region 134850
Tssr134851 15 75566897 to 75566909 12 - TSS region transcription start site region 134851
Tssr134852 15 75566911 to 75566919 8 - TSS region transcription start site region 134852
Tssr134853 15 75567015 to 75567053 38 - TSS region transcription start site region 134853
Tssr134854 15 75567164 to 75567175 11 - TSS region transcription start site region 134854
Tssr134855 15 75567176 to 75567259 83 - TSS region transcription start site region 134855
Tssr134856 15 75567279 to 75567280 1 - TSS region transcription start site region 134856
Tssr134857 15 75567651 to 75567700 49 - TSS region transcription start site region 134857
Tssr131664 15 75596624 to 75596643 19 + TSS region transcription start site region 131664
Gpihbp1 15 75596635 to 75598213 1578 + protein coding gene GPI-anchored HDL-binding protein 1
Tssr131665 15 75596645 to 75596662 17 + TSS region transcription start site region 131665
Tssr134858 15 75603921 to 75603922 1 - TSS region transcription start site region 134858
Tssr131666 15 75615117 to 75615130 13 + TSS region transcription start site region 131666
Tssr131667 15 75615160 to 75615166 6 + TSS region transcription start site region 131667
Cpgi7184 15 75615964 to 75617210 1246 CpG island CpG island 7184
Zfp41 15 75616142 to 75625477 9335 + protein coding gene zinc finger protein 41
Tssr134859 15 75616403 to 75616445 42 - TSS region transcription start site region 134859
Tssr131668 15 75616675 to 75616729 54 + TSS region transcription start site region 131668
Tssr131669 15 75616732 to 75616787 55 + TSS region transcription start site region 131669
Tssr131670 15 75626265 to 75626311 46 + TSS region transcription start site region 131670
Gm46519 15 75631965 to 75634377 2412 - lincRNA gene predicted gene, 46519
Tssr131671 15 75632276 to 75632306 30 + TSS region transcription start site region 131671
Tssr134860 15 75633827 to 75633846 19 - TSS region transcription start site region 134860
Tssr131672 15 75634212 to 75634221 9 + TSS region transcription start site region 131672
Tssr131673 15 75634240 to 75634262 22 + TSS region transcription start site region 131673
Gm38506 15 75634629 to 75644020 9391 + lncRNA gene predicted gene, 38506
Tssr131674 15 75641876 to 75641897 21 + TSS region transcription start site region 131674
Cpgi7185 15 75642130 to 75642712 582 CpG island CpG island 7185
Tssr131675 15 75642452 to 75642496 44 + TSS region transcription start site region 131675
Tssr131676 15 75642534 to 75642545 11 + TSS region transcription start site region 131676
2810039B14Rik 15 75644977 to 75647437 2460 + pseudogene RIKEN cDNA 2810039B14 gene
Cpgi7186 15 75646334 to 75647059 725 CpG island CpG island 7186
Gm46518 15 75651934 to 75655560 3626 - lncRNA gene predicted gene, 46518
Top1mt 15 75657035 to 75678800 21765 - protein coding gene DNA topoisomerase 1, mitochondrial
Gm15945 15 75661407 to 75663529 2122 + antisense lncRNA gene predicted gene 15945
Tssr134861 15 75664082 to 75664091 9 - TSS region transcription start site region 134861
Tssr134862 15 75664099 to 75664141 42 - TSS region transcription start site region 134862
Tssr134863 15 75664144 to 75664166 22 - TSS region transcription start site region 134863
Tssr134864 15 75664168 to 75664175 7 - TSS region transcription start site region 134864
Tssr134865 15 75664183 to 75664190 7 - TSS region transcription start site region 134865
Cpgi7187 15 75678389 to 75678900 511 CpG island CpG island 7187
Tssr134866 15 75678732 to 75678805 73 - TSS region transcription start site region 134866
Tssr134867 15 75683681 to 75683686 5 - TSS region transcription start site region 134867
Cpgi7188 15 75703823 to 75704669 846 CpG island CpG island 7188
Tssr4631 15 75704264 to 75704291 27 + TSS region transcription start site region 4631
Rhpn1 15 75704285 to 75714419 10134 + protein coding gene rhophilin, Rho GTPase binding protein 1
Tssr131677 15 75704300 to 75704317 17 + TSS region transcription start site region 131677
Cpgi7189 15 75711899 to 75712598 699 CpG island CpG island 7189
Cpgi7190 15 75731482 to 75732152 670 CpG island CpG island 7190
Cpgi7191 15 75746077 to 75748824 2747 CpG island CpG island 7191
Mafa 15 75746843 to 75747922 1079 - protein coding gene v-maf musculoaponeurotic fibrosarcoma oncogene family, protein A (avian)
Tssr134868 15 75748207 to 75748239 32 - TSS region transcription start site region 134868
Tssr134869 15 75748318 to 75748322 4 - TSS region transcription start site region 134869
Zc3h3 15 75754430 to 75841915 87485 - protein coding gene zinc finger CCCH type containing 3
Gm23747 15 75759859 to 75759989 130 + snoRNA gene predicted gene, 23747
Tssr134870 15 75810516 to 75810527 11 - TSS region transcription start site region 134870
Tssr134871 15 75812912 to 75812922 10 - TSS region transcription start site region 134871
Tssr131678 15 75822205 to 75822213 8 + TSS region transcription start site region 131678
Tssr134872 15 75831788 to 75831789 1 - TSS region transcription start site region 134872
Cpgi7192 15 75841331 to 75842385 1054 CpG island CpG island 7192
Tssr134873 15 75841907 to 75841932 25 - TSS region transcription start site region 134873
Tssr134874 15 75841937 to 75841954 17 - TSS region transcription start site region 134874
Tssr131679 15 75842084 to 75842133 49 + TSS region transcription start site region 131679
Gm34851 15 75843505 to 75845170 1665 + lncRNA gene predicted gene, 34851
Gm46523 15 75845968 to 75847577 1609 + lncRNA gene predicted gene, 46523
Gm9568 15 75854819 to 75856228 1409 - pseudogene predicted gene 9568
Cpgi7193 15 75862132 to 75862486 354 CpG island CpG island 7193
Tssr131680 15 75862310 to 75862370 60 + TSS region transcription start site region 131680
Gsdmd 15 75862327 to 75867408 5081 + protein coding gene gasdermin D
Tssr131681 15 75863228 to 75863238 10 + TSS region transcription start site region 131681
Tssr131682 15 75863243 to 75863267 24 + TSS region transcription start site region 131682
Tssr131683 15 75863279 to 75863294 15 + TSS region transcription start site region 131683
Tssr131684 15 75863761 to 75863763 2 + TSS region transcription start site region 131684
Tssr131685 15 75866072 to 75866100 28 + TSS region transcription start site region 131685
Tssr131686 15 75867131 to 75867140 9 + TSS region transcription start site region 131686
Cpgi7194 15 75884022 to 75884459 437 CpG island CpG island 7194
Mroh6 15 75884137 to 75888770 4633 - protein coding gene maestro heat-like repeat family member 6
Cpgi7195 15 75885369 to 75886478 1109 CpG island CpG island 7195
Tssr131687 15 75886989 to 75887003 14 + TSS region transcription start site region 131687
Cpgi7196 15 75887623 to 75887957 334 CpG island CpG island 7196
Tssr134875 15 75888754 to 75888785 31 - TSS region transcription start site region 134875
Tssr131688 15 75889832 to 75889839 7 + TSS region transcription start site region 131688
Tssr131689 15 75890658 to 75890672 14 + TSS region transcription start site region 131689
Naprt 15 75890964 to 75894481 3517 - protein coding gene nicotinate phosphoribosyltransferase
Cpgi7197 15 75893550 to 75894622 1072 CpG island CpG island 7197
Tssr134876 15 75894232 to 75894322 90 - TSS region transcription start site region 134876
Tssr134877 15 75894474 to 75894529 55 - TSS region transcription start site region 134877
Tssr134878 15 75894538 to 75894549 11 - TSS region transcription start site region 134878
Eef1d 15 75894796 to 75909577 14781 - protein coding gene eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)
Tssr134879 15 75901495 to 75901513 18 - TSS region transcription start site region 134879
Tssr134880 15 75905349 to 75905388 39 - TSS region transcription start site region 134880
Tssr131690 15 75905465 to 75905474 9 + TSS region transcription start site region 131690
Cpgi7198 15 75908811 to 75911010 2199 CpG island CpG island 7198
Tssr134881 15 75909289 to 75909311 22 - TSS region transcription start site region 134881
Tssr134882 15 75909319 to 75909330 11 - TSS region transcription start site region 134882
Tssr134883 15 75909543 to 75909567 24 - TSS region transcription start site region 134883
Tssr134884 15 75909568 to 75909593 25 - TSS region transcription start site region 134884
Tigd5 15 75909735 to 75914535 4800 + protein coding gene tigger transposable element derived 5
Tssr131691 15 75909751 to 75909766 15 + TSS region transcription start site region 131691
Pycrl 15 75916477 to 75921560 5083 - protein coding gene pyrroline-5-carboxylate reductase-like
Cpgi7199 15 75921183 to 75921563 380 CpG island CpG island 7199
Tssr134885 15 75921226 to 75921274 48 - TSS region transcription start site region 134885
Tssr134886 15 75921463 to 75921533 70 - TSS region transcription start site region 134886
Tsta3 15 75924669 to 75929821 5152 - protein coding gene tissue specific transplantation antigen P35B
Tssr134887 15 75928646 to 75928688 42 - TSS region transcription start site region 134887
Cpgi7200 15 75929371 to 75929987 616 CpG island CpG island 7200
Tssr134888 15 75929698 to 75929719 21 - TSS region transcription start site region 134888
Tssr134889 15 75929733 to 75929772 39 - TSS region transcription start site region 134889
Tssr134890 15 75929781 to 75929792 11 - TSS region transcription start site region 134890
Cpgi7201 15 75940809 to 75941762 953 CpG island CpG island 7201
Zfp623 15 75940952 to 75949400 8448 + protein coding gene zinc finger protein 623
Tssr131692 15 75940993 to 75941015 22 + TSS region transcription start site region 131692
Tssr131693 15 75941024 to 75941091 67 + TSS region transcription start site region 131693
Eif2s3x-ps1 15 75967227 to 75968335 1108 - pseudogene eukaryotic translation initiation factor 2, subunit 3, pseudogene 1
Cpgi7202 15 75968940 to 75969787 847 CpG island CpG island 7202
Tssr131694 15 75969118 to 75969160 42 + TSS region transcription start site region 131694
Zfp707 15 75969127 to 75975865 6738 + protein coding gene zinc finger protein 707
Tssr131695 15 75969168 to 75969189 21 + TSS region transcription start site region 131695
Tssr131696 15 75969204 to 75969215 11 + TSS region transcription start site region 131696
Tssr131697 15 75969287 to 75969312 25 + TSS region transcription start site region 131697
Ccdc166 15 75979872 to 75982285 2413 - protein coding gene coiled-coil domain containing 166
Cpgi7203 15 75980920 to 75982482 1562 CpG island CpG island 7203
Tssr134891 15 75981823 to 75981838 15 - TSS region transcription start site region 134891
Tssr134892 15 75981944 to 75982000 56 - TSS region transcription start site region 134892
Tssr131698 15 75982038 to 75982061 23 + TSS region transcription start site region 131698
Cpgi7204 15 75993647 to 75994064 417 CpG island CpG island 7204
Tssr131699 15 75993725 to 75993734 9 + TSS region transcription start site region 131699
Tssr131700 15 75993756 to 75993832 76 + TSS region transcription start site region 131700
Mapk15 15 75993769 to 75999154 5385 + protein coding gene mitogen-activated protein kinase 15
Tssr131701 15 75996762 to 75996778 16 + TSS region transcription start site region 131701
Cpgi7205 15 75997450 to 75999081 1631 CpG island CpG island 7205
Fam83h 15 76001093 to 76014336 13243 - protein coding gene family with sequence similarity 83, member H
Cpgi7206 15 76001942 to 76002644 702 CpG island CpG island 7206
Cpgi7207 15 76002902 to 76004745 1843 CpG island CpG island 7207
Cpgi7208 15 76008962 to 76010244 1282 CpG island CpG island 7208
Tssr134893 15 76009440 to 76009479 39 - TSS region transcription start site region 134893
Tssr131702 15 76009575 to 76009591 16 + TSS region transcription start site region 131702
Tssr131703 15 76009863 to 76009893 30 + TSS region transcription start site region 131703
Iqank1 15 76009888 to 76046981 37093 + protein coding gene IQ motif and ankyrin repeat containing 1
Tssr131704 15 76009899 to 76009921 22 + TSS region transcription start site region 131704
Tssr134894 15 76013172 to 76013183 11 - TSS region transcription start site region 134894
Tssr134895 15 76013622 to 76013627 5 - TSS region transcription start site region 134895
Tssr134896 15 76014318 to 76014346 28 - TSS region transcription start site region 134896
Tssr131705 15 76016686 to 76016687 1 + TSS region transcription start site region 131705
Tssr131706 15 76032839 to 76032842 3 + TSS region transcription start site region 131706
Tssr131707 15 76033045 to 76033055 10 + TSS region transcription start site region 131707
Cpgi7209 15 76033894 to 76035171 1277 CpG island CpG island 7209
Tssr131708 15 76034697 to 76034714 17 + TSS region transcription start site region 131708
Gm23027 15 76036459 to 76036616 157 + snRNA gene predicted gene, 23027
Scrib 15 76047162 to 76069784 22622 - protein coding gene scribbled planar cell polarity
Tssr134897 15 76047656 to 76047701 45 - TSS region transcription start site region 134897