Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:71886089-73161340

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92 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lfnq3 15 40313626 to 72500731 32187105 QTL lung function QTL 3
Col22a1 15 71795795 to 72034227 238432 - protein coding gene collagen, type XXII, alpha 1
Hwtf1 15 71800000 to 73000000 1200000 QTL heart weight by femur 1
Cath5 15 71917280 to 71917280 0 QTL carotid atherosclerosis 5
Tssr134645 15 71954352 to 71954364 12 - TSS region transcription start site region 134645
Tssr134646 15 71954368 to 71954381 13 - TSS region transcription start site region 134646
Tssr134647 15 71954386 to 71954393 7 - TSS region transcription start site region 134647
Tssr134648 15 71954395 to 71954424 29 - TSS region transcription start site region 134648
Cpgi7150 15 72006738 to 72007054 316 CpG island CpG island 7150
Tssr134649 15 72034202 to 72034224 22 - TSS region transcription start site region 134649
D15Mit157 15 72101571 to 72101673 102 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 157
Gm49457 15 72161346 to 72287314 125968 + lincRNA gene predicted gene, 49457
Milac6 15 72211957 to 72211957 0 QTL methamphetamine induced locomotor activation 6
Gm23217 15 72255350 to 72255456 106 - snRNA gene predicted gene, 23217
Gm24390 15 72490958 to 72491019 61 - snRNA gene predicted gene, 24390
D15Mit105 15 72500610 to 72500731 121 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 105
Cocia2 15 72500610 to 80014977 7514367 QTL cocaine induced activation 2
Emo2 15 72500610 to 76910293 4409683 QTL emotionality 2
Kcnk9 15 72501089 to 72546340 45251 - protein coding gene potassium channel, subfamily K, member 9
A930009L07Rik 15 72506988 to 72509257 2269 unclassified non-coding RNA gene RIKEN cDNA A930009L07 gene
Cpgi7151 15 72512126 to 72512586 460 CpG island CpG island 7151
D15Mit93 15 72539670 to 72539813 143 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 93
Cpgi7152 15 72545815 to 72548092 2277 CpG island CpG island 7152
Tssr134650 15 72547637 to 72547644 7 - TSS region transcription start site region 134650
Tssr134651 15 72547688 to 72547707 19 - TSS region transcription start site region 134651
Cpgi7153 15 72549399 to 72549645 246 CpG island CpG island 7153
Gm49460 15 72588283 to 72606053 17770 + antisense lncRNA gene predicted gene, 49460
Trappc9 15 72589620 to 73061204 471584 - protein coding gene trafficking protein particle complex 9
Cpgi7154 15 72668493 to 72668758 265 CpG island CpG island 7154
Gm28020 15 72721321 to 72721387 66 - snRNA gene predicted gene, 28020
Gm49459 15 72725404 to 72725860 456 + pseudogene predicted gene, 49459
3100002H20Rik 15 72785715 to 72787085 1370 unclassified gene RIKEN cDNA 3100002H20 gene
Peg13 15 72805604 to 72810324 4720 - sense intronic lncRNA gene paternally expressed 13
Tssr134652 15 72806225 to 72806245 20 - TSS region transcription start site region 134652
Tssr134653 15 72806425 to 72806446 21 - TSS region transcription start site region 134653
Tssr134654 15 72806714 to 72806726 12 - TSS region transcription start site region 134654
Cpgi7155 15 72809377 to 72810812 1435 CpG island CpG island 7155
Tssr134655 15 72809928 to 72809939 11 - TSS region transcription start site region 134655
Tssr134656 15 72809945 to 72809960 15 - TSS region transcription start site region 134656
Tssr134657 15 72809965 to 72810013 48 - TSS region transcription start site region 134657
Tssr134658 15 72810026 to 72810037 11 - TSS region transcription start site region 134658
Tssr134659 15 72810296 to 72810332 36 - TSS region transcription start site region 134659
Tssr4617 15 72814418 to 72814435 17 + TSS region transcription start site region 4617
D15Mit169 15 72816943 to 72817073 130 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 169
Tssr134660 15 72820012 to 72820018 6 - TSS region transcription start site region 134660
Gm41343 15 72845973 to 72848834 2861 + lncRNA gene predicted gene, 41343
Tssr4618 15 72848881 to 72848882 1 + TSS region transcription start site region 4618
Gm3150 15 72913357 to 72913560 203 + pseudogene predicted gene 3150
Tssr134661 15 72921420 to 72921452 32 - TSS region transcription start site region 134661
Tssr134662 15 72925602 to 72925611 9 - TSS region transcription start site region 134662
Tssr134663 15 72925627 to 72925636 9 - TSS region transcription start site region 134663
Tssr134664 15 72925711 to 72925723 12 - TSS region transcription start site region 134664
Tssr134665 15 72930189 to 72930216 27 - TSS region transcription start site region 134665
Gm31665 15 72969876 to 72975798 5922 + lncRNA gene predicted gene, 31665
Tssr131513 15 72972077 to 72972094 17 + TSS region transcription start site region 131513
Tssr4619 15 73021593 to 73021605 12 + TSS region transcription start site region 4619
Tssr134666 15 73030822 to 73030829 7 - TSS region transcription start site region 134666
Tssr134667 15 73038625 to 73038636 11 - TSS region transcription start site region 134667
Tssr134668 15 73038638 to 73038658 20 - TSS region transcription start site region 134668
Tssr134669 15 73038790 to 73038815 25 - TSS region transcription start site region 134669
Tssr134670 15 73040766 to 73040773 7 - TSS region transcription start site region 134670
Tssr134671 15 73052237 to 73052245 8 - TSS region transcription start site region 134671
Cpgi7156 15 73058046 to 73058544 498 CpG island CpG island 7156
Tssr134672 15 73060213 to 73060259 46 - TSS region transcription start site region 134672
Cpgi7157 15 73060405 to 73061314 909 CpG island CpG island 7157
Tssr134673 15 73061004 to 73061096 92 - TSS region transcription start site region 134673
Tssr134674 15 73061223 to 73061234 11 - TSS region transcription start site region 134674
Cpgi7158 15 73067385 to 73067975 590 CpG island CpG island 7158
Cpgi7159 15 73090031 to 73091218 1187 CpG island CpG island 7159
Tssr131514 15 73090392 to 73090441 49 + TSS region transcription start site region 131514
Chrac1 15 73090412 to 73094075 3663 + protein coding gene chromatin accessibility complex 1
Tssr131515 15 73090847 to 73090886 39 + TSS region transcription start site region 131515
Tssr131516 15 73091452 to 73091457 5 + TSS region transcription start site region 131516
Tssr134675 15 73096922 to 73096937 15 - TSS region transcription start site region 134675
Ago2 15 73101625 to 73184947 83322 - protein coding gene argonaute RISC catalytic subunit 2
Tssr134676 15 73102879 to 73102881 2 - TSS region transcription start site region 134676
Gm31725 15 73108884 to 73113618 4734 + lncRNA gene predicted gene, 31725
D15Mit197 15 73117593 to 73117703 110 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 197
Tssr134677 15 73140169 to 73140179 10 - TSS region transcription start site region 134677
Cpgi7160 15 73140294 to 73140564 270 CpG island CpG island 7160
Tssr134678 15 73147861 to 73147879 18 - TSS region transcription start site region 134678
Tssr131517 15 73148142 to 73148185 43 + TSS region transcription start site region 131517
Tssr4620 15 73148552 to 73148565 13 - TSS region transcription start site region 4620
Tssr131518 15 73149022 to 73149030 8 + TSS region transcription start site region 131518
Tssr131519 15 73149835 to 73149884 49 + TSS region transcription start site region 131519
Tssr131520 15 73153498 to 73153526 28 + TSS region transcription start site region 131520
Tssr134679 15 73154631 to 73154643 12 - TSS region transcription start site region 134679
Tssr131521 15 73155571 to 73155578 7 + TSS region transcription start site region 131521
Tssr131522 15 73155585 to 73155590 5 + TSS region transcription start site region 131522
Tssr131523 15 73155596 to 73155606 10 + TSS region transcription start site region 131523
Tssr134680 15 73156557 to 73156604 47 - TSS region transcription start site region 134680
Tssr134681 15 73157204 to 73157227 23 - TSS region transcription start site region 134681