Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:25373879-25748091

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Basp1 15 25363277 to 25413764 50487 - protein coding gene brain abundant, membrane attached signal protein 1
Tssr133836 15 25390457 to 25390478 21 - TSS region transcription start site region 133836
Tssr133837 15 25390626 to 25390640 14 - TSS region transcription start site region 133837
Tssr133838 15 25396025 to 25396026 1 - TSS region transcription start site region 133838
Cpgi6968 15 25412367 to 25414936 2569 CpG island CpG island 6968
Tssr133839 15 25413728 to 25413745 17 - TSS region transcription start site region 133839
Tssr133840 15 25413752 to 25413773 21 - TSS region transcription start site region 133840
Tssr130802 15 25414175 to 25414197 22 + TSS region transcription start site region 130802
Gm5468 15 25414192 to 25414873 681 + lincRNA gene predicted gene 5468
Tssr130803 15 25414305 to 25414316 11 + TSS region transcription start site region 130803
Gm48956 15 25414637 to 25445640 31003 - lincRNA gene predicted gene, 48956
Gm48957 15 25415022 to 25464362 49340 + unclassified non-coding RNA gene predicted gene, 48957
Tssr4562 15 25426026 to 25426027 1 + TSS region transcription start site region 4562
Tssr133841 15 25445633 to 25445643 10 - TSS region transcription start site region 133841
D15Mit110 15 25456364 to 25456488 124 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 110
Gm36642 15 25528879 to 25593091 64212 - lincRNA gene predicted gene, 36642
Cpgi6969 15 25621989 to 25623493 1504 CpG island CpG island 6969
Tssr130804 15 25622525 to 25622558 33 + TSS region transcription start site region 130804
Myo10 15 25622550 to 25813671 191121 + protein coding gene myosin X
Tssr130805 15 25622566 to 25622581 15 + TSS region transcription start site region 130805
Tssr130806 15 25622747 to 25622754 7 + TSS region transcription start site region 130806
Tssr130807 15 25622759 to 25622777 18 + TSS region transcription start site region 130807
Tssr130808 15 25626182 to 25626207 25 + TSS region transcription start site region 130808
Tssr130809 15 25626221 to 25626233 12 + TSS region transcription start site region 130809
Tssr130810 15 25626417 to 25626440 23 + TSS region transcription start site region 130810
Tssr130811 15 25626449 to 25626472 23 + TSS region transcription start site region 130811
Tssr130812 15 25632332 to 25632341 9 + TSS region transcription start site region 130812
Gm48996 15 25634627 to 25638243 3616 + unclassified gene predicted gene, 48996
Tssr130813 15 25655135 to 25655166 31 + TSS region transcription start site region 130813
Tssr130814 15 25655263 to 25655272 9 + TSS region transcription start site region 130814
Gm2862 15 25681798 to 25682125 327 + pseudogene predicted gene 2862
D15Mit127 15 25686036 to 25686171 135 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 127
Tssr130815 15 25708263 to 25708268 5 + TSS region transcription start site region 130815
Cpgi6970 15 25713686 to 25714383 697 CpG island CpG island 6970
Tssr130816 15 25713870 to 25713885 15 + TSS region transcription start site region 130816
Tssr130817 15 25724811 to 25724822 11 + TSS region transcription start site region 130817
Tssr130818 15 25726627 to 25726630 3 + TSS region transcription start site region 130818
Tssr130819 15 25742314 to 25742322 8 + TSS region transcription start site region 130819