Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:103340108-103690133

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99 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi7890 15 103339795 to 103340187 392 CpG island CpG island 7890
Tssr136770 15 103340102 to 103340125 23 - TSS region transcription start site region 136770
Tssr136771 15 103340130 to 103340141 11 - TSS region transcription start site region 136771
Itga5 15 103344286 to 103366763 22477 - protein coding gene integrin alpha 5 (fibronectin receptor alpha)
Tssr136772 15 103344558 to 103344574 16 - TSS region transcription start site region 136772
Tssr136773 15 103344638 to 103344656 18 - TSS region transcription start site region 136773
Tssr136774 15 103344712 to 103344724 12 - TSS region transcription start site region 136774
Tssr136775 15 103344730 to 103344767 37 - TSS region transcription start site region 136775
Tssr136776 15 103344774 to 103344789 15 - TSS region transcription start site region 136776
Tssr136777 15 103344806 to 103344833 27 - TSS region transcription start site region 136777
Tssr136778 15 103347255 to 103347263 8 - TSS region transcription start site region 136778
Mir6963 15 103350455 to 103350525 70 - miRNA gene microRNA 6963
Tssr136779 15 103353757 to 103353784 27 - TSS region transcription start site region 136779
Cpgi7891 15 103365554 to 103366837 1283 CpG island CpG island 7891
Tssr136780 15 103366527 to 103366579 52 - TSS region transcription start site region 136780
Tssr136781 15 103366588 to 103366600 12 - TSS region transcription start site region 136781
Tssr136782 15 103366770 to 103366798 28 - TSS region transcription start site region 136782
Tssr136783 15 103376807 to 103376840 33 - TSS region transcription start site region 136783
Gm37322 15 103378071 to 103378407 336 + unclassified gene predicted gene, 37322
Tssr136784 15 103393659 to 103393671 12 - TSS region transcription start site region 136784
Gtsf1 15 103402458 to 103430446 27988 - protein coding gene gametocyte specific factor 1
Tssr136785 15 103420549 to 103420558 9 - TSS region transcription start site region 136785
Tssr136786 15 103429538 to 103429542 4 - TSS region transcription start site region 136786
Tssr136787 15 103429547 to 103429565 18 - TSS region transcription start site region 136787
Cpgi7892 15 103430200 to 103430558 358 CpG island CpG island 7892
Tssr136788 15 103430359 to 103430373 14 - TSS region transcription start site region 136788
Tssr136789 15 103430384 to 103430385 1 - TSS region transcription start site region 136789
Tssr136790 15 103430388 to 103430431 43 - TSS region transcription start site region 136790
Gtsf2 15 103438957 to 103448469 9512 - protein coding gene gametocyte specific factor 2
Gm9106 15 103445380 to 103446699 1319 - pseudogene predicted gene 9106
Tssr136791 15 103446648 to 103446668 20 - TSS region transcription start site region 136791
Tssr136792 15 103448455 to 103448464 9 - TSS region transcription start site region 136792
Tssr136793 15 103448473 to 103448492 19 - TSS region transcription start site region 136793
Tssr133538 15 103453782 to 103453860 78 + TSS region transcription start site region 133538
Nckap1l 15 103453794 to 103498810 45016 + protein coding gene NCK associated protein 1 like
Tssr133539 15 103453905 to 103453915 10 + TSS region transcription start site region 133539
Tssr133540 15 103462733 to 103462791 58 + TSS region transcription start site region 133540
Tssr133541 15 103464573 to 103464587 14 + TSS region transcription start site region 133541
Tssr133542 15 103470702 to 103470713 11 + TSS region transcription start site region 133542
D15Mit79 15 103472156 to 103472268 112 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 79
Tssr133543 15 103473534 to 103473548 14 + TSS region transcription start site region 133543
Tssr133544 15 103479117 to 103479125 8 + TSS region transcription start site region 133544
Tssr133545 15 103479129 to 103479144 15 + TSS region transcription start site region 133545
Tssr133546 15 103479180 to 103479185 5 + TSS region transcription start site region 133546
Cpgi7893 15 103502519 to 103504032 1513 CpG island CpG island 7893
Tssr133547 15 103502951 to 103503030 79 + TSS region transcription start site region 133547
Pde1b 15 103503034 to 103530052 27018 + protein coding gene phosphodiesterase 1B, Ca2+-calmodulin dependent
Tssr133548 15 103503038 to 103503045 7 + TSS region transcription start site region 133548
Tssr133549 15 103503067 to 103503088 21 + TSS region transcription start site region 133549
Tssr133550 15 103503163 to 103503217 54 + TSS region transcription start site region 133550
Tssr4745 15 103503219 to 103503241 22 + TSS region transcription start site region 4745
Tssr133551 15 103503250 to 103503259 9 + TSS region transcription start site region 133551
Tssr133552 15 103503261 to 103503288 27 + TSS region transcription start site region 133552
Tssr133553 15 103514331 to 103514352 21 + TSS region transcription start site region 133553
Tssr133554 15 103515108 to 103515133 25 + TSS region transcription start site region 133554
Tssr133555 15 103515244 to 103515254 10 + TSS region transcription start site region 133555
D15Mit35 15 103517333 to 103517472 139 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 35
Bhr2 15 103517472 to 64434485 -39082987 QTL bronchial hyperresponsiveness 2
Bmd4 15 103517472 to 56323312 -47194160 QTL bone mineral density 4
Cal7 15 103517472 to 99121283 -4396189 heritable phenotypic marker caracul-like 7
Dshv1 15 103517472 to 92890759 -10626713 QTL dorsal hippocampal volume 1
Eae32 15 103517472 to 32578270 -70939202 QTL experimental allergic encephalomyelitis susceptibility 32
Ppp1r1a 15 103530279 to 103538003 7724 - protein coding gene protein phosphatase 1, regulatory inhibitor subunit 1A
Tssr136794 15 103534392 to 103534404 12 - TSS region transcription start site region 136794
Cpgi7894 15 103537007 to 103538157 1150 CpG island CpG island 7894
Tssr136795 15 103537928 to 103538019 91 - TSS region transcription start site region 136795
Tssr136796 15 103538021 to 103538032 11 - TSS region transcription start site region 136796
Tssr133556 15 103538066 to 103538088 22 + TSS region transcription start site region 133556
Tssr133557 15 103538098 to 103538111 13 + TSS region transcription start site region 133557
Tssr136797 15 103538310 to 103538341 31 - TSS region transcription start site region 136797
Glycam1 15 103562759 to 103565081 2322 - protein coding gene glycosylation dependent cell adhesion molecule 1
Tssr136798 15 103562796 to 103562809 13 - TSS region transcription start site region 136798
Tssr136799 15 103562825 to 103562833 8 - TSS region transcription start site region 136799
Tssr133558 15 103562827 to 103562865 38 + TSS region transcription start site region 133558
Tssr136800 15 103562836 to 103562846 10 - TSS region transcription start site region 136800
Tssr136801 15 103562866 to 103562876 10 - TSS region transcription start site region 136801
Tssr136802 15 103562921 to 103562929 8 - TSS region transcription start site region 136802
Tssr136803 15 103562930 to 103562941 11 - TSS region transcription start site region 136803
Tssr136804 15 103562951 to 103562960 9 - TSS region transcription start site region 136804
Tssr133559 15 103562962 to 103562971 9 + TSS region transcription start site region 133559
Tssr136805 15 103562994 to 103563004 10 - TSS region transcription start site region 136805
Tssr136806 15 103563272 to 103563275 3 - TSS region transcription start site region 136806
Tssr136807 15 103563281 to 103563292 11 - TSS region transcription start site region 136807
Tssr136808 15 103563294 to 103563298 4 - TSS region transcription start site region 136808
Tssr136809 15 103563305 to 103563309 4 - TSS region transcription start site region 136809
Tssr136810 15 103563333 to 103563344 11 - TSS region transcription start site region 136810
Tssr136811 15 103563381 to 103563393 12 - TSS region transcription start site region 136811
Tssr133560 15 103563399 to 103563420 21 + TSS region transcription start site region 133560
Tssr136812 15 103563408 to 103563429 21 - TSS region transcription start site region 136812
Tssr136813 15 103563431 to 103563463 32 - TSS region transcription start site region 136813
Tssr136814 15 103564222 to 103564252 30 - TSS region transcription start site region 136814
Tssr136815 15 103565069 to 103565088 19 - TSS region transcription start site region 136815
Gm9108 15 103586944 to 103588368 1424 - pseudogene predicted gene 9108
Tssr136816 15 103588393 to 103588401 8 - TSS region transcription start site region 136816
Gm46539 15 103609534 to 103631409 21875 + lncRNA gene predicted gene, 46539
Gm49272 15 103649792 to 103655698 5906 + lincRNA gene predicted gene, 49272
Gm49273 15 103657839 to 103661681 3842 + pseudogene predicted gene, 49273
Gm49274 15 103661105 to 103661512 407 - pseudogene predicted gene, 49274
Gm49275 15 103661886 to 103661982 96 - pseudogene predicted gene, 49275