Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:102503843-102645067

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Map3k12 15 102497647 to 102517004 19357 - protein coding gene mitogen-activated protein kinase kinase kinase 12
Gm10337 15 102503722 to 102503886 164 + protein coding gene predicted gene 10337
Cpgi7822 15 102510449 to 102511039 590 CpG island CpG island 7822
Tssr136698 15 102510624 to 102510649 25 - TSS region transcription start site region 136698
Tssr136699 15 102510681 to 102510705 24 - TSS region transcription start site region 136699
Tssr136700 15 102510768 to 102510797 29 - TSS region transcription start site region 136700
Tssr136701 15 102510814 to 102510825 11 - TSS region transcription start site region 136701
Tssr136702 15 102513486 to 102513490 4 - TSS region transcription start site region 136702
Gm46504 15 102516172 to 102517199 1027 + protein coding gene predicted gene, 46504
Cpgi7823 15 102516495 to 102517392 897 CpG island CpG island 7823
Tssr136703 15 102516806 to 102516855 49 - TSS region transcription start site region 136703
Tssr136704 15 102517836 to 102517856 20 - TSS region transcription start site region 136704
Cpgi7824 15 102517910 to 102518922 1012 CpG island CpG island 7824
Tarbp2 15 102518192 to 102523676 5484 + protein coding gene TARBP2, RISC loading complex RNA binding subunit
Tssr133453 15 102518307 to 102518331 24 + TSS region transcription start site region 133453
Tssr133454 15 102518405 to 102518496 91 + TSS region transcription start site region 133454
Tssr133455 15 102518714 to 102518778 64 + TSS region transcription start site region 133455
Tssr133456 15 102520739 to 102520747 8 + TSS region transcription start site region 133456
Tssr133457 15 102520798 to 102520805 7 + TSS region transcription start site region 133457
Tssr133458 15 102520818 to 102520838 20 + TSS region transcription start site region 133458
Tssr133459 15 102520846 to 102520865 19 + TSS region transcription start site region 133459
Npff 15 102523839 to 102524621 782 - protein coding gene neuropeptide FF-amide peptide precursor
Gm28047 15 102523843 to 102625067 101224 - protein coding gene predicted gene, 28047
Tssr136705 15 102524615 to 102524619 4 - TSS region transcription start site region 136705
Atf7 15 102525946 to 102625464 99518 - protein coding gene activating transcription factor 7
Tssr136706 15 102553832 to 102553854 22 - TSS region transcription start site region 136706
Tssr136707 15 102583460 to 102583466 6 - TSS region transcription start site region 136707
5830427D02Rik 15 102603008 to 102608006 4998 + lncRNA gene RIKEN cDNA 5830427D02 gene
Tssr136708 15 102624963 to 102624996 33 - TSS region transcription start site region 136708
Cpgi7825 15 102624993 to 102626153 1160 CpG island CpG island 7825
Tssr136709 15 102625061 to 102625100 39 - TSS region transcription start site region 136709
Tssr136710 15 102625436 to 102625499 63 - TSS region transcription start site region 136710
Tssr133460 15 102625584 to 102625602 18 + TSS region transcription start site region 133460
Gm25141 15 102627779 to 102627885 106 - snRNA gene predicted gene, 25141
Tssr133461 15 102634978 to 102634987 9 + TSS region transcription start site region 133461
Rpl39-ps 15 102635038 to 102635188 150 + pseudogene ribosomal protein L39, pseudogene