Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:102470449-102551039

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58 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm26518 15 102455526 to 102483722 28196 - lincRNA gene predicted gene, 26518
Cpgi7821 15 102470205 to 102471265 1060 CpG island CpG island 7821
Tssr133425 15 102470534 to 102470546 12 + TSS region transcription start site region 133425
Pcbp2 15 102470539 to 102500061 29522 + protein coding gene poly(rC) binding protein 2
Tssr133426 15 102470699 to 102470716 17 + TSS region transcription start site region 133426
Tssr133427 15 102470718 to 102470790 72 + TSS region transcription start site region 133427
Tssr133428 15 102471169 to 102471184 15 + TSS region transcription start site region 133428
Tssr133429 15 102471187 to 102471196 9 + TSS region transcription start site region 133429
Tssr133430 15 102471295 to 102471301 6 + TSS region transcription start site region 133430
Tssr4740 15 102471806 to 102471809 3 + TSS region transcription start site region 4740
Tssr133431 15 102473482 to 102473491 9 + TSS region transcription start site region 133431
Tssr133432 15 102473496 to 102473501 5 + TSS region transcription start site region 133432
Tssr133433 15 102473510 to 102473518 8 + TSS region transcription start site region 133433
Tssr133434 15 102473789 to 102473800 11 + TSS region transcription start site region 133434
Tssr133435 15 102478646 to 102478670 24 + TSS region transcription start site region 133435
Tssr133436 15 102483179 to 102483203 24 + TSS region transcription start site region 133436
Tssr133437 15 102483204 to 102483239 35 + TSS region transcription start site region 133437
Tssr133438 15 102484153 to 102484188 35 + TSS region transcription start site region 133438
Tssr133439 15 102484195 to 102484204 9 + TSS region transcription start site region 133439
Gm27406 15 102485908 to 102486089 181 + unclassified non-coding RNA gene predicted gene, 27406
Tssr133440 15 102485970 to 102485990 20 + TSS region transcription start site region 133440
Tssr133441 15 102486255 to 102486261 6 + TSS region transcription start site region 133441
Tssr133442 15 102487061 to 102487107 46 + TSS region transcription start site region 133442
Tssr133443 15 102487922 to 102487934 12 + TSS region transcription start site region 133443
Tssr133444 15 102489732 to 102489778 46 + TSS region transcription start site region 133444
Tssr133445 15 102490692 to 102490752 60 + TSS region transcription start site region 133445
Tssr133446 15 102493208 to 102493212 4 + TSS region transcription start site region 133446
Tssr133447 15 102493489 to 102493501 12 + TSS region transcription start site region 133447
Map3k12 15 102497647 to 102517004 19357 - protein coding gene mitogen-activated protein kinase kinase kinase 12
Tssr133448 15 102498509 to 102498525 16 + TSS region transcription start site region 133448
Tssr133449 15 102498527 to 102498563 36 + TSS region transcription start site region 133449
Tssr133450 15 102498678 to 102498689 11 + TSS region transcription start site region 133450
Tssr133451 15 102498729 to 102498740 11 + TSS region transcription start site region 133451
Tssr133452 15 102498767 to 102498778 11 + TSS region transcription start site region 133452
Gm10337 15 102503722 to 102503886 164 + protein coding gene predicted gene 10337
Cpgi7822 15 102510449 to 102511039 590 CpG island CpG island 7822
Tssr136698 15 102510624 to 102510649 25 - TSS region transcription start site region 136698
Tssr136699 15 102510681 to 102510705 24 - TSS region transcription start site region 136699
Tssr136700 15 102510768 to 102510797 29 - TSS region transcription start site region 136700
Tssr136701 15 102510814 to 102510825 11 - TSS region transcription start site region 136701
Tssr136702 15 102513486 to 102513490 4 - TSS region transcription start site region 136702
Gm46504 15 102516172 to 102517199 1027 + protein coding gene predicted gene, 46504
Cpgi7823 15 102516495 to 102517392 897 CpG island CpG island 7823
Tssr136703 15 102516806 to 102516855 49 - TSS region transcription start site region 136703
Tssr136704 15 102517836 to 102517856 20 - TSS region transcription start site region 136704
Cpgi7824 15 102517910 to 102518922 1012 CpG island CpG island 7824
Tarbp2 15 102518192 to 102523676 5484 + protein coding gene TARBP2, RISC loading complex RNA binding subunit
Tssr133453 15 102518307 to 102518331 24 + TSS region transcription start site region 133453
Tssr133454 15 102518405 to 102518496 91 + TSS region transcription start site region 133454
Tssr133455 15 102518714 to 102518778 64 + TSS region transcription start site region 133455
Tssr133456 15 102520739 to 102520747 8 + TSS region transcription start site region 133456
Tssr133457 15 102520798 to 102520805 7 + TSS region transcription start site region 133457
Tssr133458 15 102520818 to 102520838 20 + TSS region transcription start site region 133458
Tssr133459 15 102520846 to 102520865 19 + TSS region transcription start site region 133459
Npff 15 102523839 to 102524621 782 - protein coding gene neuropeptide FF-amide peptide precursor
Gm28047 15 102523843 to 102625067 101224 - protein coding gene predicted gene, 28047
Tssr136705 15 102524615 to 102524619 4 - TSS region transcription start site region 136705
Atf7 15 102525946 to 102625464 99518 - protein coding gene activating transcription factor 7