Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:102278247-102410759

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77 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi7809 15 102279051 to 102280101 1050 CpG island CpG island 7809
Tssr136681 15 102279359 to 102279375 16 - TSS region transcription start site region 136681
Tssr133363 15 102279430 to 102279445 15 + TSS region transcription start site region 133363
Tssr133364 15 102279446 to 102279475 29 + TSS region transcription start site region 133364
Mfsd5 15 102279456 to 102281744 2288 + protein coding gene major facilitator superfamily domain containing 5
Tssr133365 15 102279481 to 102279488 7 + TSS region transcription start site region 133365
Tssr133366 15 102279495 to 102279548 53 + TSS region transcription start site region 133366
Tssr133367 15 102279553 to 102279572 19 + TSS region transcription start site region 133367
Tssr133368 15 102279730 to 102279764 34 + TSS region transcription start site region 133368
Tssr133369 15 102280503 to 102280529 26 + TSS region transcription start site region 133369
Gm49479 15 102295437 to 102296151 714 - bidirectional promoter lncRNA gene predicted gene, 49479
Cpgi7810 15 102296067 to 102296648 581 CpG island CpG island 7810
Tssr133370 15 102296256 to 102296330 74 + TSS region transcription start site region 133370
Espl1 15 102296266 to 102324357 28091 + protein coding gene extra spindle pole bodies 1, separase
Tssr133371 15 102296407 to 102296408 1 + TSS region transcription start site region 133371
Tssr133372 15 102296414 to 102296427 13 + TSS region transcription start site region 133372
Tssr133373 15 102300384 to 102300388 4 + TSS region transcription start site region 133373
Gm49480 15 102308621 to 102308762 141 - pseudogene predicted gene, 49480
Tssr4738 15 102315411 to 102315426 15 + TSS region transcription start site region 4738
Cpgi7811 15 102325989 to 102326596 607 CpG island CpG island 7811
Pfdn5 15 102326116 to 102331490 5374 + protein coding gene prefoldin 5
Tssr133374 15 102326132 to 102326152 20 + TSS region transcription start site region 133374
Tssr133375 15 102326155 to 102326171 16 + TSS region transcription start site region 133375
Tssr133376 15 102326172 to 102326181 9 + TSS region transcription start site region 133376
Tssr133377 15 102326369 to 102326387 18 + TSS region transcription start site region 133377
Tssr133378 15 102326400 to 102326429 29 + TSS region transcription start site region 133378
Tssr133379 15 102328515 to 102328555 40 + TSS region transcription start site region 133379
Cpgi7812 15 102331582 to 102332249 667 CpG island CpG island 7812
Tssr133380 15 102331700 to 102331777 77 + TSS region transcription start site region 133380
Myg1 15 102331709 to 102338139 6430 + protein coding gene melanocyte proliferating gene 1
Tssr133381 15 102331920 to 102331953 33 + TSS region transcription start site region 133381
Tssr133382 15 102331960 to 102331991 31 + TSS region transcription start site region 133382
Aaas 15 102338247 to 102350759 12512 - protein coding gene achalasia, adrenocortical insufficiency, alacrimia
Cpgi7813 15 102350339 to 102350970 631 CpG island CpG island 7813
Tssr136682 15 102350593 to 102350605 12 - TSS region transcription start site region 136682
Tssr136683 15 102350634 to 102350690 56 - TSS region transcription start site region 136683
Tssr136684 15 102350692 to 102350771 79 - TSS region transcription start site region 136684
Gm36246 15 102350827 to 102355139 4312 + bidirectional promoter lncRNA gene predicted gene, 36246
Cpgi7814 15 102355247 to 102356384 1137 CpG island CpG island 7814
Sp7 15 102356606 to 102367040 10434 - protein coding gene Sp7 transcription factor 7
Cpgi7815 15 102358166 to 102358756 590 CpG island CpG island 7815
Tssr133383 15 102365227 to 102365235 8 + TSS region transcription start site region 133383
Tssr136685 15 102366271 to 102366282 11 - TSS region transcription start site region 136685
Tssr136686 15 102366314 to 102366338 24 - TSS region transcription start site region 136686
Tssr136687 15 102366359 to 102366368 9 - TSS region transcription start site region 136687
Tssr136688 15 102366974 to 102367023 49 - TSS region transcription start site region 136688
Gm23590 15 102373880 to 102373983 103 + snRNA gene predicted gene, 23590
Cpgi7816 15 102376678 to 102377437 759 CpG island CpG island 7816
Tssr133384 15 102376954 to 102376974 20 + TSS region transcription start site region 133384
Tssr133385 15 102386923 to 102386934 11 + TSS region transcription start site region 133385
Tssr133386 15 102391142 to 102391173 31 + TSS region transcription start site region 133386
Tssr133387 15 102392802 to 102392815 13 + TSS region transcription start site region 133387
Tssr133388 15 102392934 to 102392958 24 + TSS region transcription start site region 133388
Tssr133389 15 102393787 to 102393801 14 + TSS region transcription start site region 133389
Tssr133390 15 102394086 to 102394114 28 + TSS region transcription start site region 133390
Tssr136689 15 102395226 to 102395239 13 - TSS region transcription start site region 136689
Tssr136690 15 102398672 to 102398689 17 - TSS region transcription start site region 136690
Tssr136691 15 102398694 to 102398711 17 - TSS region transcription start site region 136691
Tssr136692 15 102399666 to 102399716 50 - TSS region transcription start site region 136692
Cpgi7817 15 102399696 to 102399852 156 CpG island CpG island 7817
Tssr133391 15 102399791 to 102399807 16 + TSS region transcription start site region 133391
Tssr133392 15 102399835 to 102399852 17 + TSS region transcription start site region 133392
Tssr133393 15 102401364 to 102401370 6 + TSS region transcription start site region 133393
Tssr133394 15 102401933 to 102401936 3 + TSS region transcription start site region 133394
Tssr133395 15 102401948 to 102401958 10 + TSS region transcription start site region 133395
Tssr133396 15 102402394 to 102402429 35 + TSS region transcription start site region 133396
Tssr136693 15 102403835 to 102403873 38 - TSS region transcription start site region 136693
Cpgi7818 15 102405154 to 102406895 1741 CpG island CpG island 7818
Tssr136694 15 102405504 to 102405521 17 - TSS region transcription start site region 136694
Tssr136695 15 102405544 to 102405573 29 - TSS region transcription start site region 136695
Tssr136696 15 102405575 to 102405620 45 - TSS region transcription start site region 136696
Tssr136697 15 102405688 to 102405702 14 - TSS region transcription start site region 136697
Tssr133397 15 102406269 to 102406333 64 + TSS region transcription start site region 133397
Sp1 15 102406316 to 102436404 30088 + protein coding gene trans-acting transcription factor 1
Tssr4739 15 102406374 to 102406398 24 + TSS region transcription start site region 4739
Tssr133398 15 102406967 to 102406977 10 + TSS region transcription start site region 133398
Tssr133399 15 102407144 to 102407147 3 + TSS region transcription start site region 133399