Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:101524299-101864318

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107 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Krt84 15 101525026 to 101532820 7794 - protein coding gene keratin 84
Tssr136574 15 101531130 to 101531138 8 - TSS region transcription start site region 136574
Tssr136575 15 101532819 to 101532824 5 - TSS region transcription start site region 136575
Krt82 15 101541216 to 101550659 9443 - protein coding gene keratin 82
Tssr136576 15 101550657 to 101550665 8 - TSS region transcription start site region 136576
Krt90 15 101552356 to 101562950 10594 - protein coding gene keratin 90
Cpgi7782 15 101553104 to 101553324 220 CpG island CpG island 7782
Gm44393 15 101557197 to 101557334 137 + miRNA gene predicted gene, 44393
Tssr136577 15 101558399 to 101558422 23 - TSS region transcription start site region 136577
Tssr136578 15 101562889 to 101562892 3 - TSS region transcription start site region 136578
Krt75 15 101563345 to 101573904 10559 - protein coding gene keratin 75
Gm44460 15 101570183 to 101570311 128 + miRNA gene predicted gene, 44460
Cpgi7783 15 101573663 to 101573883 220 CpG island CpG island 7783
Tssr136579 15 101573863 to 101573870 7 - TSS region transcription start site region 136579
Tssr136580 15 101573883 to 101573913 30 - TSS region transcription start site region 136580
Gm5476 15 101587334 to 101588543 1209 - pseudogene predicted gene 5476
Cpgi7784 15 101588176 to 101588330 154 CpG island CpG island 7784
Gm5477 15 101608874 to 101610479 1605 + pseudogene predicted gene 5477
Gm49426 15 101615297 to 101615407 110 - pseudogene predicted gene, 49426
Gm5414 15 101624028 to 101628188 4160 - protein coding gene predicted gene 5414
Tssr136581 15 101628248 to 101628252 4 - TSS region transcription start site region 136581
Gm17851 15 101638681 to 101639998 1317 + pseudogene predicted gene, 17851
Gm5478 15 101643020 to 101647380 4360 - pseudogene predicted pseudogene 5478
Gm44479 15 101645144 to 101645259 115 + miRNA gene predicted gene, 44479
Krt6b 15 101676023 to 101680287 4264 - protein coding gene keratin 6B
Tssr136582 15 101676085 to 101676103 18 - TSS region transcription start site region 136582
Tssr136583 15 101676280 to 101676288 8 - TSS region transcription start site region 136583
Tssr136584 15 101676447 to 101676466 19 - TSS region transcription start site region 136584
Tssr133303 15 101676532 to 101676543 11 + TSS region transcription start site region 133303
Gm44383 15 101678032 to 101678160 128 + miRNA gene predicted gene, 44383
Tssr136585 15 101680281 to 101680298 17 - TSS region transcription start site region 136585
Krt6a 15 101689928 to 101694305 4377 - protein coding gene keratin 6A
Tssr136586 15 101689956 to 101689989 33 - TSS region transcription start site region 136586
Tssr136587 15 101690204 to 101690212 8 - TSS region transcription start site region 136587
Gm49428 15 101690309 to 101691941 1632 + antisense lncRNA gene predicted gene, 49428
Tssr136588 15 101690378 to 101690392 14 - TSS region transcription start site region 136588
Tssr133304 15 101690463 to 101690482 19 + TSS region transcription start site region 133304
Tssr136589 15 101690500 to 101690501 1 - TSS region transcription start site region 136589
Tssr136590 15 101690508 to 101690514 6 - TSS region transcription start site region 136590
Gm44342 15 101692211 to 101692339 128 + miRNA gene predicted gene, 44342
Tssr136591 15 101692567 to 101692575 8 - TSS region transcription start site region 136591
Tssr136592 15 101693846 to 101693880 34 - TSS region transcription start site region 136592
Tssr136593 15 101694299 to 101694318 19 - TSS region transcription start site region 136593
Krt5 15 101707070 to 101712891 5821 - protein coding gene keratin 5
Tssr136594 15 101707427 to 101707445 18 - TSS region transcription start site region 136594
Tssr136595 15 101707549 to 101707563 14 - TSS region transcription start site region 136595
Tssr136596 15 101707581 to 101707593 12 - TSS region transcription start site region 136596
Tssr136597 15 101709613 to 101709627 14 - TSS region transcription start site region 136597
Tssr136598 15 101709648 to 101709663 15 - TSS region transcription start site region 136598
Tssr136599 15 101709716 to 101709753 37 - TSS region transcription start site region 136599
Tssr136600 15 101709837 to 101709856 19 - TSS region transcription start site region 136600
Gm44323 15 101710274 to 101710402 128 + miRNA gene predicted gene, 44323
Tssr133305 15 101711594 to 101711607 13 + TSS region transcription start site region 133305
Tssr136601 15 101712637 to 101712649 12 - TSS region transcription start site region 136601
Tssr136602 15 101712897 to 101712911 14 - TSS region transcription start site region 136602
Krt71 15 101733949 to 101743097 9148 - protein coding gene keratin 71
Tssr136603 15 101734306 to 101734313 7 - TSS region transcription start site region 136603
Tssr136604 15 101734403 to 101734412 9 - TSS region transcription start site region 136604
Tssr136605 15 101734414 to 101734419 5 - TSS region transcription start site region 136605
Tssr136606 15 101734485 to 101734495 10 - TSS region transcription start site region 136606
Tssr133306 15 101740232 to 101740238 6 + TSS region transcription start site region 133306
Tssr4731 15 101740240 to 101740249 9 + TSS region transcription start site region 4731
Tssr136607 15 101740352 to 101740362 10 - TSS region transcription start site region 136607
Tssr136608 15 101742918 to 101742929 11 - TSS region transcription start site region 136608
Tssr4732 15 101743031 to 101743040 9 - TSS region transcription start site region 4732
Tssr136609 15 101743099 to 101743117 18 - TSS region transcription start site region 136609
Tssr4733 15 101743127 to 101743145 18 - TSS region transcription start site region 4733
Krt74 15 101754259 to 101763504 9245 - pseudogene keratin 74
Tssr136610 15 101763557 to 101763566 9 - TSS region transcription start site region 136610
Krt72 15 101776560 to 101786458 9898 - protein coding gene keratin 72
Cpgi7785 15 101786133 to 101786538 405 CpG island CpG island 7785
Tssr136611 15 101786515 to 101786528 13 - TSS region transcription start site region 136611
Tssr136612 15 101786554 to 101786568 14 - TSS region transcription start site region 136612
Krt73 15 101793308 to 101802332 9024 - protein coding gene keratin 73
Tssr136613 15 101802350 to 101802367 17 - TSS region transcription start site region 136613
Krt2 15 101810689 to 101818169 7480 - protein coding gene keratin 2
Cpgi7786 15 101817663 to 101818072 409 CpG island CpG island 7786
Tssr136614 15 101818165 to 101818170 5 - TSS region transcription start site region 136614
Gm35972 15 101826246 to 101827656 1410 - lncRNA gene predicted gene, 35972
Krt1 15 101845426 to 101850786 5360 - protein coding gene keratin 1
Tssr136615 15 101845469 to 101845487 18 - TSS region transcription start site region 136615
Tssr136616 15 101845660 to 101845671 11 - TSS region transcription start site region 136616
Tssr136617 15 101845761 to 101845772 11 - TSS region transcription start site region 136617
Tssr136618 15 101845887 to 101845899 12 - TSS region transcription start site region 136618
Cpgi7787 15 101845914 to 101846447 533 CpG island CpG island 7787
Tssr136619 15 101845933 to 101845953 20 - TSS region transcription start site region 136619
Tssr136620 15 101845954 to 101845997 43 - TSS region transcription start site region 136620
Tssr136621 15 101846034 to 101846046 12 - TSS region transcription start site region 136621
Tssr136622 15 101846274 to 101846285 11 - TSS region transcription start site region 136622
Tssr136623 15 101846391 to 101846410 19 - TSS region transcription start site region 136623
Tssr136624 15 101846411 to 101846422 11 - TSS region transcription start site region 136624
Tssr136625 15 101846850 to 101846870 20 - TSS region transcription start site region 136625
Tssr136626 15 101846879 to 101846904 25 - TSS region transcription start site region 136626
Tssr136627 15 101846993 to 101847002 9 - TSS region transcription start site region 136627
Tssr136628 15 101848131 to 101848160 29 - TSS region transcription start site region 136628
Tssr136629 15 101849049 to 101849060 11 - TSS region transcription start site region 136629
Tssr136630 15 101849073 to 101849114 41 - TSS region transcription start site region 136630
Tssr136631 15 101849118 to 101849132 14 - TSS region transcription start site region 136631
Tssr133307 15 101850123 to 101850134 11 + TSS region transcription start site region 133307
Tssr133308 15 101850143 to 101850164 21 + TSS region transcription start site region 133308
Tssr133309 15 101850341 to 101850352 11 + TSS region transcription start site region 133309
Tssr136632 15 101850778 to 101850792 14 - TSS region transcription start site region 136632
Tssr136633 15 101851980 to 101851984 4 - TSS region transcription start site region 136633
Tssr133310 15 101854753 to 101854759 6 + TSS region transcription start site region 133310
Tssr4734 15 101858033 to 101858040 7 + TSS region transcription start site region 4734
Krt77 15 101858731 to 101869705 10974 - protein coding gene keratin 77
Cpgi7788 15 101859524 to 101860422 898 CpG island CpG island 7788