Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:85564986-88755001

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80 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm49059 14 85655204 to 85655897 693 + pseudogene predicted gene, 49059
D14Mit184 14 85946511 to 85946617 106 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 184
D14Mit204 14 85947218 to 85947366 148 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 204
Tssr129929 14 86148245 to 86148246 1 - TSS region transcription start site region 129929
Tssr126848 14 86172928 to 86172946 18 + TSS region transcription start site region 126848
Gm32729 14 86172936 to 86179569 6633 + lincRNA gene predicted gene, 32729
Gm49060 14 86204742 to 86205372 630 + pseudogene predicted gene, 49060
Gm49061 14 86215999 to 86216430 431 - pseudogene predicted gene, 49061
Gm49062 14 86229612 to 86229801 189 - pseudogene predicted gene, 49062
4930529K09Rik 14 86245970 to 86262042 16072 + lincRNA gene RIKEN cDNA 4930529K09 gene
Gm41220 14 86265766 to 86271634 5868 + lncRNA gene predicted gene, 41220
Gm32815 14 86270940 to 86294762 23822 - lncRNA gene predicted gene, 32815
Gm49063 14 86290707 to 86291220 513 + pseudogene predicted gene, 49063
Gm32860 14 86299638 to 86308198 8560 + lncRNA gene predicted gene, 32860
Gm23926 14 86311289 to 86311378 89 - snRNA gene predicted gene, 23926
Gm4350 14 86320285 to 86320863 578 + pseudogene predicted gene 4350
Gm32913 14 86396382 to 86409099 12717 - lincRNA gene predicted gene, 32913
Gm25115 14 86408522 to 86408661 139 + snRNA gene predicted gene, 25115
Gm49157 14 86503446 to 86503575 129 - pseudogene predicted gene, 49157
Gm49158 14 86511615 to 86512071 456 - pseudogene predicted gene, 49158
Gm32969 14 86525029 to 86526004 975 - lncRNA gene predicted gene, 32969
Diaph3 14 86655367 to 87141235 485868 - protein coding gene diaphanous related formin 3
Gm49159 14 86704562 to 86707185 2623 - unclassified gene predicted gene, 49159
Tssr129930 14 86721901 to 86721915 14 - TSS region transcription start site region 129930
Tssr129931 14 86749068 to 86749088 20 - TSS region transcription start site region 129931
Tssr4496 14 86749105 to 86749118 13 - TSS region transcription start site region 4496
Gm33025 14 86794644 to 86796763 2119 + lncRNA gene predicted gene, 33025
Gm41223 14 86801348 to 86808230 6882 - lncRNA gene predicted gene, 41223
Tssr129932 14 86857554 to 86857555 1 - TSS region transcription start site region 129932
Gm23438 14 86920621 to 86920711 90 - miRNA gene predicted gene, 23438
Gm41222 14 86922639 to 86926024 3385 - lncRNA gene predicted gene, 41222
Tssr129933 14 87004799 to 87004811 12 - TSS region transcription start site region 129933
Tssr129934 14 87076157 to 87076168 11 - TSS region transcription start site region 129934
Cpgi6789 14 87123176 to 87123510 334 CpG island CpG island 6789
Cpgi6790 14 87140819 to 87141436 617 CpG island CpG island 6790
Tssr129935 14 87141131 to 87141148 17 - TSS region transcription start site region 129935
Tssr129936 14 87141158 to 87141203 45 - TSS region transcription start site region 129936
Tssr129937 14 87141206 to 87141239 33 - TSS region transcription start site region 129937
Tssr129938 14 87141821 to 87141830 9 - TSS region transcription start site region 129938
Tssr4497 14 87159986 to 87160001 15 + TSS region transcription start site region 4497
Gm49193 14 87160005 to 87162165 2160 + pseudogene predicted gene, 49193
Gm37002 14 87199702 to 87200074 372 - unclassified gene predicted gene, 37002
Cpgi6791 14 87264385 to 87264584 199 CpG island CpG island 6791
Gm23278 14 87346245 to 87346387 142 + snoRNA gene predicted gene, 23278
Cpgi6792 14 87415625 to 87417596 1971 CpG island CpG island 6792
Tssr126849 14 87416007 to 87416022 15 + TSS region transcription start site region 126849
Tssr126850 14 87416124 to 87416142 18 + TSS region transcription start site region 126850
Tssr4498 14 87416378 to 87416409 31 + TSS region transcription start site region 4498
Tssr126851 14 87416610 to 87416655 45 + TSS region transcription start site region 126851
Tdrd3 14 87416639 to 87545504 128865 + protein coding gene tudor domain containing 3
Tssr126852 14 87416694 to 87416723 29 + TSS region transcription start site region 126852
Tssr126853 14 87416726 to 87416745 19 + TSS region transcription start site region 126853
Tssr126854 14 87416762 to 87416778 16 + TSS region transcription start site region 126854
Tssr126855 14 87417031 to 87417066 35 + TSS region transcription start site region 126855
Gm49199 14 87428350 to 87429315 965 + unclassified gene predicted gene, 49199
Gm33121 14 87441208 to 87441690 482 - pseudogene predicted gene, 33121
Gm49197 14 87492953 to 87495153 2200 + unclassified gene predicted gene, 49197
D14Mit125 14 87626332 to 87626490 158 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 125
Ossc3 14 87626332 to 87626490 158 QTL osteosarcoma susceptibility 3
Gm48922 14 87637292 to 87637470 178 - pseudogene predicted gene, 48922
Lprm3 14 87983788 to 87983908 120 QTL lymphoproliferation modifier 3
D14Mit195 14 87983788 to 87983908 120 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 195
Gm18812 14 87990229 to 87991072 843 - pseudogene predicted gene, 18812
D14Mit218 14 88014495 to 88014741 246 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 218
Gm4355 14 88096816 to 88098042 1226 - pseudogene predicted gene 4355
Rps3a2 14 88123017 to 88123808 791 - pseudogene ribosomal protein S3A2
Tssr129939 14 88123824 to 88123835 11 - TSS region transcription start site region 129939
Gm26405 14 88126998 to 88127097 99 + rRNA gene predicted gene, 26405
Gm33203 14 88264735 to 88337532 72797 - lincRNA gene predicted gene, 33203
Gm9274 14 88349372 to 88350355 983 - pseudogene predicted gene 9274
Tssr129940 14 88350426 to 88350429 3 - TSS region transcription start site region 129940
Gm48929 14 88355004 to 88355497 493 - pseudogene predicted gene, 48929
Gm9275 14 88395940 to 88396714 774 + pseudogene predicted gene 9275
Gm48930 14 88415390 to 88416025 635 - pseudogene predicted gene, 48930
Tssr4499 14 88437779 to 88437781 2 + TSS region transcription start site region 4499
Pcdh20 14 88464747 to 88471396 6649 - protein coding gene protocadherin 20
Cpgi6793 14 88470802 to 88471092 290 CpG island CpG island 6793
Tssr129941 14 88470943 to 88471022 79 - TSS region transcription start site region 129941
Tssr126856 14 88636028 to 88636039 11 + TSS region transcription start site region 126856
Gm41225 14 88636049 to 88760924 124875 + lincRNA gene predicted gene, 41225