Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:71078640-72728646

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79 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Epfpq1 14 21012382 to 71648361 50635979 QTL epididymal fat percentage QTL 1
Gm49289 14 71087270 to 71147008 59738 + lincRNA gene predicted gene, 49289
Gm34757 14 71163830 to 71167244 3414 - lncRNA gene predicted gene, 34757
Tssr126500 14 71237389 to 71237392 3 + TSS region transcription start site region 126500
Tssr126501 14 71251264 to 71251284 20 + TSS region transcription start site region 126501
Gm4251 14 71251273 to 71271051 19778 + lincRNA gene predicted gene 4251
Tssr4474 14 71263770 to 71263773 3 - TSS region transcription start site region 4474
Gm37455 14 71371002 to 71371530 528 - unclassified gene predicted gene, 37455
Gm41203 14 71418387 to 71420467 2080 - lncRNA gene predicted gene, 41203
Tssr4475 14 71420991 to 71420995 4 + TSS region transcription start site region 4475
Tssr126502 14 71421006 to 71421017 11 + TSS region transcription start site region 126502
4930429C20Rik 14 71421012 to 71421611 599 + lincRNA gene RIKEN cDNA 4930429C20 gene
D14Mit193 14 71521620 to 71521737 117 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 193
Gm34819 14 71620507 to 71733827 113320 + lncRNA gene predicted gene, 34819
D14Mit34 14 71648206 to 71648361 155 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 34
Gm34998 14 71769931 to 71839271 69340 + lncRNA gene predicted gene, 34998
Gm9192 14 71819567 to 71820551 984 - pseudogene predicted gene 9192
4921504P05Rik 14 71844422 to 71845694 1272 unclassified gene RIKEN cDNA 4921504P05 gene
4930434J06Rik 14 71856709 to 71920438 63729 + lincRNA gene RIKEN cDNA 4930434J06 gene
Tssr126503 14 71856710 to 71856717 7 + TSS region transcription start site region 126503
Tssr126504 14 71880681 to 71880715 34 + TSS region transcription start site region 126504
Tssr126505 14 71903640 to 71903646 6 + TSS region transcription start site region 126505
D14Mit192 14 71917404 to 71917665 261 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 192
1700003K11Rik 14 71946793 to 71947212 419 unclassified gene RIKEN cDNA 1700003K11 gene
Cpgi6716 14 71967001 to 71967442 441 CpG island CpG island 6716
Gm35079 14 72039792 to 72042936 3144 - lncRNA gene predicted gene, 35079
Gm41204 14 72115878 to 72131897 16019 - lncRNA gene predicted gene, 41204
Gm23735 14 72131088 to 72131221 133 + snRNA gene predicted gene, 23735
Gm41205 14 72158560 to 72184524 25964 - lncRNA gene predicted gene, 41205
Gm49290 14 72195317 to 72195696 379 - pseudogene predicted gene, 49290
D14Mit90 14 72275767 to 72275854 87 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 90
Tssr129653 14 72284518 to 72284528 10 - TSS region transcription start site region 129653
Cpgi6717 14 72368968 to 72369169 201 CpG island CpG island 6717
Cpgi6718 14 72385558 to 72385872 314 CpG island CpG island 6718
Gm9195 14 72431660 to 72461654 29994 - protein coding gene predicted gene 9195
Gm30500 14 72472092 to 72491848 19756 - protein coding gene predicted gene, 30500
D14Mit68 14 72514310 to 72514462 152 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 68
Mlnr-ps 14 72531024 to 72532649 1625 - pseudogene motilin receptor, pseudogene
Cpgi6719 14 72531889 to 72532891 1002 CpG island CpG island 6719
Fndc3a 14 72537946 to 72710003 172057 - protein coding gene fibronectin type III domain containing 3A
Tssr129654 14 72538941 to 72538968 27 - TSS region transcription start site region 129654
Tssr129655 14 72539065 to 72539076 11 - TSS region transcription start site region 129655
Tssr129656 14 72539145 to 72539175 30 - TSS region transcription start site region 129656
Tssr129657 14 72539200 to 72539219 19 - TSS region transcription start site region 129657
Tssr129658 14 72539503 to 72539546 43 - TSS region transcription start site region 129658
Tssr129659 14 72539597 to 72539609 12 - TSS region transcription start site region 129659
Tssr129660 14 72556186 to 72556221 35 - TSS region transcription start site region 129660
Tssr129661 14 72561640 to 72561654 14 - TSS region transcription start site region 129661
Tssr129662 14 72584600 to 72584618 18 - TSS region transcription start site region 129662
Tssr126506 14 72584651 to 72584678 27 + TSS region transcription start site region 126506
Tssr129663 14 72584817 to 72584828 11 - TSS region transcription start site region 129663
Gm16549 14 72589752 to 72603367 13615 + antisense lncRNA gene predicted gene 16549
Tssr129664 14 72589793 to 72589822 29 - TSS region transcription start site region 129664
Tssr129665 14 72589826 to 72589885 59 - TSS region transcription start site region 129665
Tssr129666 14 72589896 to 72589928 32 - TSS region transcription start site region 129666
Tssr129667 14 72602945 to 72603003 58 - TSS region transcription start site region 129667
Tssr129668 14 72603009 to 72603022 13 - TSS region transcription start site region 129668
Tssr129669 14 72604219 to 72604223 4 - TSS region transcription start site region 129669
Tssr126507 14 72634351 to 72634359 8 + TSS region transcription start site region 126507
Tssr129670 14 72669362 to 72669373 11 - TSS region transcription start site region 129670
Tssr129671 14 72669397 to 72669405 8 - TSS region transcription start site region 129671
Tssr129672 14 72673038 to 72673054 16 - TSS region transcription start site region 129672
Tssr129673 14 72683744 to 72683779 35 - TSS region transcription start site region 129673
A130078K24Rik 14 72699215 to 72703608 4393 unclassified gene RIKEN cDNA A130078K24 gene
Cpgi6720 14 72708958 to 72710813 1855 CpG island CpG island 6720
Tssr129674 14 72709432 to 72709471 39 - TSS region transcription start site region 129674
Tssr126508 14 72709512 to 72709516 4 + TSS region transcription start site region 126508
Tssr129675 14 72709534 to 72709549 15 - TSS region transcription start site region 129675
Tssr129676 14 72709796 to 72709805 9 - TSS region transcription start site region 129676
Tssr129677 14 72709822 to 72709829 7 - TSS region transcription start site region 129677
Tssr129678 14 72709844 to 72709859 15 - TSS region transcription start site region 129678
Tssr129679 14 72709886 to 72709897 11 - TSS region transcription start site region 129679
Tssr129680 14 72709950 to 72709961 11 - TSS region transcription start site region 129680
Tssr129681 14 72709969 to 72709978 9 - TSS region transcription start site region 129681
Tssr129682 14 72709986 to 72710027 41 - TSS region transcription start site region 129682
Tssr129683 14 72710052 to 72710060 8 - TSS region transcription start site region 129683
Tssr126509 14 72710095 to 72710122 27 + TSS region transcription start site region 126509
Tssr129684 14 72710574 to 72710638 64 - TSS region transcription start site region 129684
Tssr129685 14 72710758 to 72710769 11 - TSS region transcription start site region 129685