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Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:61440272-62851005

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158 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi6581 14 61439127 to 61440474 1347 CpG island CpG island 6581
2900024I21Rik 14 61448487 to 61450136 1649 unclassified gene RIKEN cDNA 2900024I21 gene
Gm49298 14 61459267 to 61459721 454 + pseudogene predicted gene, 49298
Rps12-ps2 14 61466968 to 61467366 398 - pseudogene ribosomal protein S12, pseudogene 2
Gm41169 14 61472841 to 61490398 17557 + lncRNA gene predicted gene, 41169
4930556J02Rik 14 61492688 to 61500382 7694 + lincRNA gene RIKEN cDNA 4930556J02 gene
Tssr125979 14 61492691 to 61492700 9 + TSS region transcription start site region 125979
Tssr125980 14 61492713 to 61492721 8 + TSS region transcription start site region 125980
Tssr125981 14 61492731 to 61492741 10 + TSS region transcription start site region 125981
Tssr125982 14 61519349 to 61519383 34 + TSS region transcription start site region 125982
Spryd7 14 61531993 to 61556886 24893 - protein coding gene SPRY domain containing 7
Vmn1r-ps136 14 61543727 to 61544108 381 + pseudogene vomeronasal 1 receptor, pseudogene 136
Cpgi6582 14 61556210 to 61557741 1531 CpG island CpG island 6582
Tssr129083 14 61556632 to 61556641 9 - TSS region transcription start site region 129083
Tssr129084 14 61556665 to 61556674 9 - TSS region transcription start site region 129084
Tssr129085 14 61556723 to 61556741 18 - TSS region transcription start site region 129085
Tssr129086 14 61556746 to 61556781 35 - TSS region transcription start site region 129086
Tssr129087 14 61556783 to 61556797 14 - TSS region transcription start site region 129087
Tssr129088 14 61556881 to 61556890 9 - TSS region transcription start site region 129088
Gm4118 14 61558798 to 61559442 644 + pseudogene predicted gene 4118
Tssr125983 14 61598226 to 61598241 15 + TSS region transcription start site region 125983
Tssr125984 14 61598242 to 61598252 10 + TSS region transcription start site region 125984
Del(14Trim13-Rnaseh2b)6Rdf 14 61598247 to 62372992 774745 chromosomal deletion deletion, Chr 14, Riccardo Dalla-Favera 6
Del(14Trim13-Dleu2)3Rdf 14 61598247 to 61682373 84126 chromosomal deletion deletion, Chr 14, Riccardo Dalla-Favera 3
Del(14Trim13-Dleu2)4Rdf 14 61598247 to 61682373 84126 chromosomal deletion deletion, Chr 14, Riccardo Dalla-Favera 4
Trim13 14 61598247 to 61605946 7699 + protein coding gene tripartite motif-containing 13
Tssr125985 14 61598264 to 61598286 22 + TSS region transcription start site region 125985
Tssr125986 14 61598300 to 61598310 10 + TSS region transcription start site region 125986
Cpgi6583 14 61599234 to 61599791 557 CpG island CpG island 6583
Tssr125987 14 61599493 to 61599548 55 + TSS region transcription start site region 125987
Tssr125988 14 61599550 to 61599569 19 + TSS region transcription start site region 125988
Tssr125989 14 61599570 to 61599584 14 + TSS region transcription start site region 125989
Dleu2 14 61602839 to 61682373 79534 - lncRNA gene deleted in lymphocytic leukemia, 2
Tssr125990 14 61607415 to 61607426 11 + TSS region transcription start site region 125990
Tssr125991 14 61607455 to 61607458 3 + TSS region transcription start site region 125991
Kcnrg 14 61607457 to 61612826 5369 + protein coding gene potassium channel regulator
Tssr129089 14 61609867 to 61609870 3 - TSS region transcription start site region 129089
Tssr129090 14 61614873 to 61614877 4 - TSS region transcription start site region 129090
Gm27010 14 61625926 to 61627337 1411 - lincRNA gene predicted gene, 27010
Tssr129091 14 61626922 to 61626923 1 - TSS region transcription start site region 129091
Gm27845 14 61629093 to 61629206 113 + unclassified non-coding RNA gene predicted gene, 27845
Gm26916 14 61629484 to 61630414 930 + lincRNA gene predicted gene, 26916
Mir16-1 14 61631880 to 61631972 92 - miRNA gene microRNA 16-1
Mirc30 14 61631880 to 61632110 230 complex/cluster/region microRNA cluster 30, including Mir16-1 through Mir15a
Tssr129092 14 61631888 to 61631893 5 - TSS region transcription start site region 129092
Mir15a 14 61632027 to 61632110 83 - miRNA gene microRNA 15a
Tssr129093 14 61633134 to 61633138 4 - TSS region transcription start site region 129093
Tssr129094 14 61636072 to 61636120 48 - TSS region transcription start site region 129094
Gm27747 14 61643371 to 61643455 84 + unclassified non-coding RNA gene predicted gene, 27747
Cpgi6584 14 61647509 to 61649446 1937 CpG island CpG island 6584
Tssr125992 14 61648360 to 61648365 5 + TSS region transcription start site region 125992
Tssr125993 14 61648414 to 61648430 16 + TSS region transcription start site region 125993
Tssr125994 14 61648435 to 61648445 10 + TSS region transcription start site region 125994
Tssr125995 14 61648456 to 61648465 9 + TSS region transcription start site region 125995
Gm27972 14 61648638 to 61648774 136 + unclassified non-coding RNA gene predicted gene, 27972
Tssr129095 14 61648762 to 61648807 45 - TSS region transcription start site region 129095
Tssr129096 14 61648811 to 61648814 3 - TSS region transcription start site region 129096
Gm27017 14 61648950 to 61667312 18362 + lincRNA gene predicted gene, 27017
Tssr129097 14 61656812 to 61656816 4 - TSS region transcription start site region 129097
Gm27928 14 61666387 to 61666642 255 + unclassified non-coding RNA gene predicted gene, 27928
Gm37420 14 61667220 to 61670131 2911 - unclassified gene predicted gene, 37420
Gm37472 14 61677443 to 61681494 4051 - unclassified gene predicted gene, 37472
Cpgi6585 14 61680839 to 61683314 2475 CpG island CpG island 6585
Tssr125996 14 61680963 to 61680995 32 + TSS region transcription start site region 125996
Tssr125997 14 61681543 to 61681569 26 + TSS region transcription start site region 125997
Tssr125998 14 61681977 to 61681986 9 + TSS region transcription start site region 125998
Tssr129098 14 61682310 to 61682335 25 - TSS region transcription start site region 129098
Tssr125999 14 61682575 to 61682610 35 + TSS region transcription start site region 125999
Gm37820 14 61683510 to 61685656 2146 + unclassified gene predicted gene, 37820
Tssr129099 14 61683847 to 61683891 44 - TSS region transcription start site region 129099
Cpgi6586 14 61686102 to 61687378 1276 CpG island CpG island 6586
Gm35196 14 61686786 to 61690598 3812 - lncRNA gene predicted gene, 35196
Cpgi6587 14 61689343 to 61690064 721 CpG island CpG island 6587
Tssr129100 14 61690888 to 61690894 6 - TSS region transcription start site region 129100
Gm46480 14 61707016 to 61708794 1778 + lncRNA gene predicted gene, 46480
Tssr4445 14 61768102 to 61768106 4 + TSS region transcription start site region 4445
Tssr4446 14 61805170 to 61805171 1 + TSS region transcription start site region 4446
Gm35247 14 61817815 to 61822477 4662 + lncRNA gene predicted gene, 35247
Gm41171 14 61845334 to 61846707 1373 - lncRNA gene predicted gene, 41171
Tssr126000 14 61861676 to 61861684 8 + TSS region transcription start site region 126000
Ebao3 14 61891444 to 61891444 0 QTL epidermolysis bullosa acquisita onset 3
Gm47952 14 61921376 to 61922063 687 + pseudogene predicted gene, 47952
Tssr126001 14 61959903 to 61959912 9 + TSS region transcription start site region 126001
Gm47953 14 62012319 to 62012633 314 + pseudogene predicted gene, 47953
Gm35307 14 62034867 to 62038927 4060 + lncRNA gene predicted gene, 35307
Gm35419 14 62120272 to 62171005 50733 - lincRNA gene predicted gene, 35419
Gm35361 14 62146811 to 62147539 728 + lncRNA gene predicted gene, 35361
Gm26969 14 62201915 to 62204352 2437 - lincRNA gene predicted gene, 26969
Dleu7 14 62276229 to 62292979 16750 - protein coding gene deleted in lymphocytic leukemia, 7
Cpgi6588 14 62292366 to 62293211 845 CpG island CpG island 6588
Tssr126002 14 62292475 to 62292496 21 + TSS region transcription start site region 126002
Tssr129101 14 62292959 to 62293019 60 - TSS region transcription start site region 129101
Tssr129102 14 62293177 to 62293213 36 - TSS region transcription start site region 129102
Tssr129103 14 62293228 to 62293240 12 - TSS region transcription start site region 129103
Gm41173 14 62327882 to 62332043 4161 - lncRNA gene predicted gene, 41173
Cpgi6589 14 62331710 to 62332589 879 CpG island CpG island 6589
Tssr126003 14 62332085 to 62332110 25 + TSS region transcription start site region 126003
Rnaseh2b 14 62332105 to 62372992 40887 + protein coding gene ribonuclease H2, subunit B
Tssr129104 14 62346993 to 62347004 11 - TSS region transcription start site region 129104
Tssr129105 14 62347027 to 62347030 3 - TSS region transcription start site region 129105
Gm46457 14 62379184 to 62392563 13379 + lncRNA gene predicted gene, 46457
D14Mit37 14 62383443 to 62383581 138 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 37
Gucy1b2 14 62392676 to 62456289 63613 - protein coding gene guanylate cyclase 1, soluble, beta 2
Tssr129106 14 62411813 to 62411817 4 - TSS region transcription start site region 129106
Tssr126004 14 62413556 to 62413567 11 + TSS region transcription start site region 126004
Tssr129107 14 62414279 to 62414327 48 - TSS region transcription start site region 129107
Tssr129108 14 62414493 to 62414507 14 - TSS region transcription start site region 129108
Gm35468 14 62440284 to 62446721 6437 + lncRNA gene predicted gene, 35468
Gm41172 14 62456467 to 62459180 2713 + lncRNA gene predicted gene, 41172
Cpgi6590 14 62457481 to 62457694 213 CpG island CpG island 6590
Gm4131 14 62462486 to 62481765 19279 - protein coding gene predicted gene 4131
Cpgi6591 14 62464829 to 62465003 174 CpG island CpG island 6591
Tssr129109 14 62465061 to 62465072 11 - TSS region transcription start site region 129109
Cpgi6592 14 62481021 to 62481320 299 CpG island CpG island 6592
Tssr129110 14 62481133 to 62481143 10 - TSS region transcription start site region 129110
Tssr129111 14 62497335 to 62497342 7 - TSS region transcription start site region 129111
Tssr126005 14 62497561 to 62497572 11 + TSS region transcription start site region 126005
Gm46482 14 62506860 to 62515217 8357 + lncRNA gene predicted gene, 46482
Gm6076 14 62514848 to 62515295 447 - pseudogene predicted gene 6076
Gm24625 14 62521023 to 62521152 129 + snoRNA gene predicted gene, 24625
Tssr129112 14 62531034 to 62531072 38 - TSS region transcription start site region 129112
Tssr129113 14 62531073 to 62531086 13 - TSS region transcription start site region 129113
Gm5802 14 62540493 to 62541193 700 - pseudogene predicted gene 5802
Gm35595 14 62541380 to 62541575 195 - protein coding gene predicted gene, 35595
Cpgi6593 14 62555332 to 62556383 1051 CpG island CpG island 6593
Tssr126006 14 62555620 to 62555633 13 + TSS region transcription start site region 126006
Tssr126007 14 62555642 to 62555699 57 + TSS region transcription start site region 126007
Fam124a 14 62555737 to 62608486 52749 + protein coding gene family with sequence similarity 124, member A
Tssr126008 14 62555738 to 62555812 74 + TSS region transcription start site region 126008
Cpgi6594 14 62587146 to 62587889 743 CpG island CpG island 6594
Gm23816 14 62634962 to 62635093 131 - snoRNA gene predicted gene, 23816
Tssr4447 14 62654265 to 62654267 2 + TSS region transcription start site region 4447
Tssr126009 14 62663665 to 62663672 7 + TSS region transcription start site region 126009
Serpine3 14 62663667 to 62692243 28576 + protein coding gene serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3
Gm25162 14 62668612 to 62668770 158 + snoRNA gene predicted gene, 25162
Ints6 14 62676330 to 62761169 84839 - protein coding gene integrator complex subunit 6
Tssr129114 14 62700654 to 62700701 47 - TSS region transcription start site region 129114
Cpgi6595 14 62759535 to 62761884 2349 CpG island CpG island 6595
Tssr126010 14 62760464 to 62760484 20 + TSS region transcription start site region 126010
Tssr126011 14 62760485 to 62760493 8 + TSS region transcription start site region 126011
Tssr126012 14 62760496 to 62760521 25 + TSS region transcription start site region 126012
4931440J10Rik 14 62760501 to 62830126 69625 + lincRNA gene RIKEN cDNA 4931440J10 gene
Tssr129115 14 62760888 to 62760901 13 - TSS region transcription start site region 129115
Tssr4448 14 62761112 to 62761121 9 - TSS region transcription start site region 4448
Tssr129116 14 62761127 to 62761145 18 - TSS region transcription start site region 129116
Tssr126013 14 62761757 to 62761782 25 + TSS region transcription start site region 126013
Gm35678 14 62773250 to 62799664 26414 - lncRNA gene predicted gene, 35678
Gm18146 14 62779697 to 62780210 513 + pseudogene predicted gene, 18146
Gm47505 14 62818843 to 62819642 799 + pseudogene predicted gene, 47505
Gm26536 14 62836908 to 62838207 1299 - lincRNA gene predicted gene, 26536
Cpgi6596 14 62837116 to 62838318 1202 CpG island CpG island 6596
Tssr126014 14 62837679 to 62837726 47 + TSS region transcription start site region 126014
Wdfy2 14 62837690 to 62961509 123819 + protein coding gene WD repeat and FYVE domain containing 2
Mir8098 14 62837721 to 62837857 136 + miRNA gene microRNA 8098
Tssr126015 14 62837729 to 62837754 25 + TSS region transcription start site region 126015
Tssr126016 14 62837759 to 62837770 11 + TSS region transcription start site region 126016
Tssr129117 14 62838495 to 62838540 45 - TSS region transcription start site region 129117
Tssr126017 14 62838626 to 62838677 51 + TSS region transcription start site region 126017