Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:57499926-57829934

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51 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ift88 14 57424069 to 57517936 93867 + protein coding gene intraflagellar transport 88
Ift88os 14 57506744 to 57510835 4091 - antisense lncRNA gene intraflagellar transport 88, opposite strand
AU020094 14 57523805 to 57524834 1029 unclassified gene expressed sequence AU020094
Cpgi6542 14 57524532 to 57526053 1521 CpG island CpG island 6542
Tssr125870 14 57524734 to 57524804 70 + TSS region transcription start site region 125870
Il17d 14 57524829 to 57543166 18337 + protein coding gene interleukin 17D
Tssr125871 14 57525052 to 57525105 53 + TSS region transcription start site region 125871
Tssr128966 14 57525456 to 57525467 11 - TSS region transcription start site region 128966
Tssr128967 14 57525499 to 57525525 26 - TSS region transcription start site region 128967
Tssr128968 14 57525569 to 57525645 76 - TSS region transcription start site region 128968
Tssr125872 14 57537487 to 57537494 7 + TSS region transcription start site region 125872
Cpgi6543 14 57542184 to 57542765 581 CpG island CpG island 6543
Eef1akmt1 14 57549596 to 57571569 21973 - protein coding gene EEF1A alpha lysine methyltransferase 1
Cpgi6544 14 57571365 to 57571768 403 CpG island CpG island 6544
Tssr128969 14 57571551 to 57571588 37 - TSS region transcription start site region 128969
Tssr125873 14 57571594 to 57571625 31 + TSS region transcription start site region 125873
1700039M10Rik 14 57571614 to 57572368 754 + bidirectional promoter lncRNA gene RIKEN cDNA 1700039M10 gene
Xpo4 14 57579755 to 57665512 85757 - protein coding gene exportin 4
Tssr128970 14 57598616 to 57598617 1 - TSS region transcription start site region 128970
Gm49361 14 57642077 to 57746103 104026 - protein coding gene predicted gene, 49361
Tssr128971 14 57662216 to 57662224 8 - TSS region transcription start site region 128971
Cpgi6545 14 57664298 to 57665686 1388 CpG island CpG island 6545
Tssr128972 14 57664926 to 57664934 8 - TSS region transcription start site region 128972
Tssr128973 14 57664954 to 57664995 41 - TSS region transcription start site region 128973
Tssr128974 14 57665192 to 57665260 68 - TSS region transcription start site region 128974
Lats2 14 57689662 to 57746123 56461 - protein coding gene large tumor suppressor 2
Gm26440 14 57697809 to 57697937 128 + snoRNA gene predicted gene, 26440
Gm20430 14 57698013 to 57698219 206 + pseudogene predicted gene 20430
Tssr125874 14 57702777 to 57702778 1 + TSS region transcription start site region 125874
Tssr128975 14 57718975 to 57718978 3 - TSS region transcription start site region 128975
Tssr128976 14 57744650 to 57744655 5 - TSS region transcription start site region 128976
Tssr125875 14 57744780 to 57744803 23 + TSS region transcription start site region 125875
Cpgi6546 14 57745269 to 57746569 1300 CpG island CpG island 6546
Tssr128977 14 57746044 to 57746144 100 - TSS region transcription start site region 128977
Tssr125876 14 57746148 to 57746195 47 + TSS region transcription start site region 125876
D14Mit261 14 57753925 to 57754016 91 DNA segment DNA Segment, Chr 14 Massachusetts Institute of Technology 261
Cpgi6547 14 57797946 to 57799041 1095 CpG island CpG island 6547
Tssr125877 14 57798156 to 57798180 24 + TSS region transcription start site region 125877
Tssr125878 14 57798182 to 57798216 34 + TSS region transcription start site region 125878
Sap18 14 57798189 to 57804980 6791 + protein coding gene Sin3-associated polypeptide 18
Mir3077 14 57798424 to 57798487 63 + miRNA gene microRNA 3077
Tssr125879 14 57798620 to 57798629 9 + TSS region transcription start site region 125879
Tssr125880 14 57798637 to 57798696 59 + TSS region transcription start site region 125880
Tssr125881 14 57798699 to 57798708 9 + TSS region transcription start site region 125881
Ska3 14 57806561 to 57826185 19624 - protein coding gene spindle and kinetochore associated complex subunit 3
Cpgi6548 14 57825778 to 57826886 1108 CpG island CpG island 6548
Tssr128978 14 57826128 to 57826180 52 - TSS region transcription start site region 128978
Tssr128979 14 57826185 to 57826203 18 - TSS region transcription start site region 128979
Tssr125882 14 57826210 to 57826272 62 + TSS region transcription start site region 125882
Mrpl57 14 57826228 to 57829087 2859 + protein coding gene mitochondrial ribosomal protein L57
Tssr125883 14 57826371 to 57826417 46 + TSS region transcription start site region 125883