Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:54835036-54915071

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rnf212b 14 54814141 to 54854108 39967 + protein coding gene ring finger protein 212B
Homez 14 54852736 to 54870961 18225 - protein coding gene homeodomain leucine zipper-encoding gene
Cpgi6475 14 54863647 to 54864612 965 CpG island CpG island 6475
Tssr128648 14 54864055 to 54864151 96 - TSS region transcription start site region 128648
Tssr128649 14 54870913 to 54870947 34 - TSS region transcription start site region 128649
Tssr128650 14 54875036 to 54875071 35 - TSS region transcription start site region 128650
Ppp1r3e 14 54875597 to 54877538 1941 - protein coding gene protein phosphatase 1, regulatory subunit 3E
Cpgi6476 14 54875924 to 54877870 1946 CpG island CpG island 6476
Tssr128651 14 54877132 to 54877177 45 - TSS region transcription start site region 128651
Tssr128652 14 54877532 to 54877552 20 - TSS region transcription start site region 128652
Tssr125671 14 54883320 to 54883391 71 + TSS region transcription start site region 125671
Bcl2l2 14 54883377 to 54888234 4857 + protein coding gene BCL2-like 2
Tssr125672 14 54883430 to 54883489 59 + TSS region transcription start site region 125672
Gm20521 14 54883441 to 54898137 14696 + protein coding gene predicted gene 20521
Tssr125673 14 54883570 to 54883594 24 + TSS region transcription start site region 125673
Tssr125674 14 54891520 to 54891524 4 + TSS region transcription start site region 125674
Tssr125675 14 54892492 to 54892500 8 + TSS region transcription start site region 125675
Cpgi6477 14 54893596 to 54894869 1273 CpG island CpG island 6477
Tssr128653 14 54893859 to 54893899 40 - TSS region transcription start site region 128653
Tssr4415 14 54893977 to 54893998 21 + TSS region transcription start site region 4415
Tssr4416 14 54894046 to 54894049 3 + TSS region transcription start site region 4416
Tssr125676 14 54894133 to 54894153 20 + TSS region transcription start site region 125676
Pabpn1 14 54894143 to 54898927 4784 + protein coding gene poly(A) binding protein, nuclear 1
Tssr4417 14 54894170 to 54894175 5 + TSS region transcription start site region 4417
Tssr4418 14 54894274 to 54894323 49 + TSS region transcription start site region 4418
Tssr125677 14 54894578 to 54894627 49 + TSS region transcription start site region 125677
Tssr128654 14 54894877 to 54894915 38 - TSS region transcription start site region 128654
Tssr125678 14 54897162 to 54897189 27 + TSS region transcription start site region 125678
Tssr125679 14 54898395 to 54898415 20 + TSS region transcription start site region 125679
Slc22a17 14 54906304 to 54913132 6828 - protein coding gene solute carrier family 22 (organic cation transporter), member 17
Tssr128655 14 54907157 to 54907168 11 - TSS region transcription start site region 128655
Tssr128656 14 54907578 to 54907597 19 - TSS region transcription start site region 128656
Tssr128657 14 54908910 to 54908926 16 - TSS region transcription start site region 128657
Cpgi6478 14 54911959 to 54913306 1347 CpG island CpG island 6478
Tssr128658 14 54912317 to 54912331 14 - TSS region transcription start site region 128658
Tssr128659 14 54912443 to 54912458 15 - TSS region transcription start site region 128659
Tssr128660 14 54913037 to 54913042 5 - TSS region transcription start site region 128660
Tssr128661 14 54913064 to 54913084 20 - TSS region transcription start site region 128661
Tssr128662 14 54913089 to 54913128 39 - TSS region transcription start site region 128662