Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:54661934-54901952

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80 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Acin1 14 54642161 to 54686931 44770 - protein coding gene apoptotic chromatin condensation inducer 1
Gm8776 14 54681098 to 54681726 628 + pseudogene predicted gene 8776
Tssr125664 14 54681099 to 54681100 1 + TSS region transcription start site region 125664
Cpgi6471 14 54686011 to 54687060 1049 CpG island CpG island 6471
Tssr128618 14 54686132 to 54686167 35 - TSS region transcription start site region 128618
Tssr128619 14 54686169 to 54686198 29 - TSS region transcription start site region 128619
Tssr4413 14 54686170 to 54686184 14 + TSS region transcription start site region 4413
Tssr125665 14 54686201 to 54686230 29 + TSS region transcription start site region 125665
1700123O20Rik 14 54686216 to 54690741 4525 + protein coding gene RIKEN cDNA 1700123O20 gene
Tssr125666 14 54686242 to 54686261 19 + TSS region transcription start site region 125666
Tssr128620 14 54686272 to 54686283 11 - TSS region transcription start site region 128620
Tssr125667 14 54686373 to 54686398 25 + TSS region transcription start site region 125667
Tssr128621 14 54686605 to 54686647 42 - TSS region transcription start site region 128621
Tssr128622 14 54686926 to 54686970 44 - TSS region transcription start site region 128622
Tssr125668 14 54686982 to 54687063 81 + TSS region transcription start site region 125668
Gm29776 14 54692598 to 54698833 6235 - protein coding gene predicted gene, 29776
Cebpe 14 54710363 to 54712174 1811 - protein coding gene CCAAT/enhancer binding protein (C/EBP), epsilon
Cpgi6472 14 54710597 to 54710792 195 CpG island CpG island 6472
Tssr4414 14 54711903 to 54711949 46 - TSS region transcription start site region 4414
Tssr128623 14 54712120 to 54712134 14 - TSS region transcription start site region 128623
Tssr128624 14 54712139 to 54712153 14 - TSS region transcription start site region 128624
Tssr128625 14 54712330 to 54712367 37 - TSS region transcription start site region 128625
Tssr128626 14 54712397 to 54712408 11 - TSS region transcription start site region 128626
Slc7a8 14 54722215 to 54781886 59671 - protein coding gene solute carrier family 7 (cationic amino acid transporter, y+ system), member 8
Tssr128627 14 54723269 to 54723281 12 - TSS region transcription start site region 128627
Tssr128628 14 54723366 to 54723391 25 - TSS region transcription start site region 128628
Tssr128629 14 54723571 to 54723578 7 - TSS region transcription start site region 128629
Tssr128630 14 54723761 to 54723782 21 - TSS region transcription start site region 128630
Tssr128631 14 54723802 to 54723821 19 - TSS region transcription start site region 128631
Tssr125669 14 54723953 to 54723965 12 + TSS region transcription start site region 125669
Tssr128632 14 54724038 to 54724049 11 - TSS region transcription start site region 128632
Tssr128633 14 54724066 to 54724086 20 - TSS region transcription start site region 128633
Tssr128634 14 54724098 to 54724109 11 - TSS region transcription start site region 128634
Tssr128635 14 54724179 to 54724191 12 - TSS region transcription start site region 128635
Tssr128636 14 54724208 to 54724217 9 - TSS region transcription start site region 128636
Tssr128637 14 54724794 to 54724808 14 - TSS region transcription start site region 128637
Tssr128638 14 54726752 to 54726802 50 - TSS region transcription start site region 128638
Tssr128639 14 54726816 to 54726827 11 - TSS region transcription start site region 128639
Tssr128640 14 54733249 to 54733263 14 - TSS region transcription start site region 128640
Tssr128641 14 54740124 to 54740129 5 - TSS region transcription start site region 128641
Tssr128642 14 54752164 to 54752212 48 - TSS region transcription start site region 128642
Tssr128643 14 54759672 to 54759683 11 - TSS region transcription start site region 128643
Tssr128644 14 54768353 to 54768395 42 - TSS region transcription start site region 128644
Tssr128645 14 54779802 to 54779815 13 - TSS region transcription start site region 128645
Cpgi6473 14 54781106 to 54782041 935 CpG island CpG island 6473
Tssr128646 14 54781906 to 54781925 19 - TSS region transcription start site region 128646
Tssr128647 14 54781934 to 54781952 18 - TSS region transcription start site region 128647
Gm17772 14 54805746 to 54806096 350 - pseudogene predicted gene, 17772
Cpgi6474 14 54814011 to 54814352 341 CpG island CpG island 6474
Rnf212b 14 54814141 to 54854108 39967 + protein coding gene ring finger protein 212B
Tssr125670 14 54814144 to 54814156 12 + TSS region transcription start site region 125670
Gm8865 14 54826247 to 54826676 429 - pseudogene predicted gene 8865
Homez 14 54852736 to 54870961 18225 - protein coding gene homeodomain leucine zipper-encoding gene
Cpgi6475 14 54863647 to 54864612 965 CpG island CpG island 6475
Tssr128648 14 54864055 to 54864151 96 - TSS region transcription start site region 128648
Tssr128649 14 54870913 to 54870947 34 - TSS region transcription start site region 128649
Tssr128650 14 54875036 to 54875071 35 - TSS region transcription start site region 128650
Ppp1r3e 14 54875597 to 54877538 1941 - protein coding gene protein phosphatase 1, regulatory subunit 3E
Cpgi6476 14 54875924 to 54877870 1946 CpG island CpG island 6476
Tssr128651 14 54877132 to 54877177 45 - TSS region transcription start site region 128651
Tssr128652 14 54877532 to 54877552 20 - TSS region transcription start site region 128652
Tssr125671 14 54883320 to 54883391 71 + TSS region transcription start site region 125671
Bcl2l2 14 54883377 to 54888234 4857 + protein coding gene BCL2-like 2
Tssr125672 14 54883430 to 54883489 59 + TSS region transcription start site region 125672
Gm20521 14 54883441 to 54898137 14696 + protein coding gene predicted gene 20521
Tssr125673 14 54883570 to 54883594 24 + TSS region transcription start site region 125673
Tssr125674 14 54891520 to 54891524 4 + TSS region transcription start site region 125674
Tssr125675 14 54892492 to 54892500 8 + TSS region transcription start site region 125675
Cpgi6477 14 54893596 to 54894869 1273 CpG island CpG island 6477
Tssr128653 14 54893859 to 54893899 40 - TSS region transcription start site region 128653
Tssr4415 14 54893977 to 54893998 21 + TSS region transcription start site region 4415
Tssr4416 14 54894046 to 54894049 3 + TSS region transcription start site region 4416
Tssr125676 14 54894133 to 54894153 20 + TSS region transcription start site region 125676
Pabpn1 14 54894143 to 54898927 4784 + protein coding gene poly(A) binding protein, nuclear 1
Tssr4417 14 54894170 to 54894175 5 + TSS region transcription start site region 4417
Tssr4418 14 54894274 to 54894323 49 + TSS region transcription start site region 4418
Tssr125677 14 54894578 to 54894627 49 + TSS region transcription start site region 125677
Tssr128654 14 54894877 to 54894915 38 - TSS region transcription start site region 128654
Tssr125678 14 54897162 to 54897189 27 + TSS region transcription start site region 125678
Tssr125679 14 54898395 to 54898415 20 + TSS region transcription start site region 125679