Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:54642598-54748833

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47 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm17606 14 54640952 to 54648293 7341 + protein coding gene predicted gene, 17606
Acin1 14 54642161 to 54686931 44770 - protein coding gene apoptotic chromatin condensation inducer 1
Mir6948 14 54643049 to 54643110 61 - miRNA gene microRNA 6948
4930579G18Rik 14 54650511 to 54654607 4096 + antisense lncRNA gene RIKEN cDNA 4930579G18 gene
Cpgi6470 14 54653489 to 54653652 163 CpG island CpG island 6470
Tssr128615 14 54653662 to 54653701 39 - TSS region transcription start site region 128615
Tssr128616 14 54653732 to 54653743 11 - TSS region transcription start site region 128616
Tssr128617 14 54654219 to 54654222 3 - TSS region transcription start site region 128617
Gm8776 14 54681098 to 54681726 628 + pseudogene predicted gene 8776
Tssr125664 14 54681099 to 54681100 1 + TSS region transcription start site region 125664
Cpgi6471 14 54686011 to 54687060 1049 CpG island CpG island 6471
Tssr128618 14 54686132 to 54686167 35 - TSS region transcription start site region 128618
Tssr128619 14 54686169 to 54686198 29 - TSS region transcription start site region 128619
Tssr4413 14 54686170 to 54686184 14 + TSS region transcription start site region 4413
Tssr125665 14 54686201 to 54686230 29 + TSS region transcription start site region 125665
1700123O20Rik 14 54686216 to 54690741 4525 + protein coding gene RIKEN cDNA 1700123O20 gene
Tssr125666 14 54686242 to 54686261 19 + TSS region transcription start site region 125666
Tssr128620 14 54686272 to 54686283 11 - TSS region transcription start site region 128620
Tssr125667 14 54686373 to 54686398 25 + TSS region transcription start site region 125667
Tssr128621 14 54686605 to 54686647 42 - TSS region transcription start site region 128621
Tssr128622 14 54686926 to 54686970 44 - TSS region transcription start site region 128622
Tssr125668 14 54686982 to 54687063 81 + TSS region transcription start site region 125668
Gm29776 14 54692598 to 54698833 6235 - protein coding gene predicted gene, 29776
Cebpe 14 54710363 to 54712174 1811 - protein coding gene CCAAT/enhancer binding protein (C/EBP), epsilon
Cpgi6472 14 54710597 to 54710792 195 CpG island CpG island 6472
Tssr4414 14 54711903 to 54711949 46 - TSS region transcription start site region 4414
Tssr128623 14 54712120 to 54712134 14 - TSS region transcription start site region 128623
Tssr128624 14 54712139 to 54712153 14 - TSS region transcription start site region 128624
Tssr128625 14 54712330 to 54712367 37 - TSS region transcription start site region 128625
Tssr128626 14 54712397 to 54712408 11 - TSS region transcription start site region 128626
Slc7a8 14 54722215 to 54781886 59671 - protein coding gene solute carrier family 7 (cationic amino acid transporter, y+ system), member 8
Tssr128627 14 54723269 to 54723281 12 - TSS region transcription start site region 128627
Tssr128628 14 54723366 to 54723391 25 - TSS region transcription start site region 128628
Tssr128629 14 54723571 to 54723578 7 - TSS region transcription start site region 128629
Tssr128630 14 54723761 to 54723782 21 - TSS region transcription start site region 128630
Tssr128631 14 54723802 to 54723821 19 - TSS region transcription start site region 128631
Tssr125669 14 54723953 to 54723965 12 + TSS region transcription start site region 125669
Tssr128632 14 54724038 to 54724049 11 - TSS region transcription start site region 128632
Tssr128633 14 54724066 to 54724086 20 - TSS region transcription start site region 128633
Tssr128634 14 54724098 to 54724109 11 - TSS region transcription start site region 128634
Tssr128635 14 54724179 to 54724191 12 - TSS region transcription start site region 128635
Tssr128636 14 54724208 to 54724217 9 - TSS region transcription start site region 128636
Tssr128637 14 54724794 to 54724808 14 - TSS region transcription start site region 128637
Tssr128638 14 54726752 to 54726802 50 - TSS region transcription start site region 128638
Tssr128639 14 54726816 to 54726827 11 - TSS region transcription start site region 128639
Tssr128640 14 54733249 to 54733263 14 - TSS region transcription start site region 128640
Tssr128641 14 54740124 to 54740129 5 - TSS region transcription start site region 128641