Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:54447170-54587702

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52 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
5430430K15Rik 14 54446318 to 54447861 1543 + unclassified gene RIKEN cDNA 5430430K15 gene
Cpgi6457 14 54449166 to 54449544 378 CpG island CpG island 6457
Gm24424 14 54449958 to 54450064 106 - snRNA gene predicted gene, 24424
Tssr128589 14 54462796 to 54462799 3 - TSS region transcription start site region 128589
Gm10366 14 54463042 to 54464742 1700 - antisense lncRNA gene predicted gene 10366
Cpgi6458 14 54463865 to 54464965 1100 CpG island CpG island 6458
Tssr125650 14 54463898 to 54463912 14 + TSS region transcription start site region 125650
Tssr4410 14 54463915 to 54463926 11 + TSS region transcription start site region 4410
Tssr4411 14 54464030 to 54464050 20 - TSS region transcription start site region 4411
Tssr128590 14 54464053 to 54464067 14 - TSS region transcription start site region 128590
Tssr128591 14 54464069 to 54464083 14 - TSS region transcription start site region 128591
Tssr125651 14 54464141 to 54464222 81 + TSS region transcription start site region 125651
Lrp10 14 54464147 to 54470292 6145 + protein coding gene low-density lipoprotein receptor-related protein 10
Tssr125652 14 54464480 to 54464515 35 + TSS region transcription start site region 125652
Tssr125653 14 54467485 to 54467519 34 + TSS region transcription start site region 125653
Tssr125654 14 54467600 to 54467611 11 + TSS region transcription start site region 125654
Tssr125655 14 54467957 to 54467977 20 + TSS region transcription start site region 125655
Tssr125656 14 54468114 to 54468127 13 + TSS region transcription start site region 125656
Tssr125657 14 54469328 to 54469351 23 + TSS region transcription start site region 125657
Rem2 14 54476100 to 54480431 4331 + protein coding gene rad and gem related GTP binding protein 2
Tssr125658 14 54476183 to 54476190 7 + TSS region transcription start site region 125658
Cpgi6459 14 54476189 to 54476484 295 CpG island CpG island 6459
Tssr125659 14 54476212 to 54476228 16 + TSS region transcription start site region 125659
Tssr4412 14 54476246 to 54476259 13 + TSS region transcription start site region 4412
Cpgi6460 14 54479221 to 54479894 673 CpG island CpG island 6460
Gm41153 14 54492313 to 54492913 600 - lncRNA gene predicted gene, 41153
Prmt5 14 54507182 to 54517470 10288 - protein coding gene protein arginine N-methyltransferase 5
Cpgi6461 14 54517170 to 54517702 532 CpG island CpG island 6461
Tssr128592 14 54517353 to 54517401 48 - TSS region transcription start site region 128592
n-TRacg6 14 54517696 to 54517768 72 + tRNA gene nuclear encoded tRNA arginine 6 (anticodon ACG)
Haus4 14 54541785 to 54554361 12576 - protein coding gene HAUS augmin-like complex, subunit 4
Tssr125660 14 54549550 to 54549598 48 + TSS region transcription start site region 125660
Tssr128593 14 54550036 to 54550040 4 - TSS region transcription start site region 128593
Cpgi6462 14 54553481 to 54554978 1497 CpG island CpG island 6462
Tssr125661 14 54554044 to 54554061 17 + TSS region transcription start site region 125661
Tssr128594 14 54554268 to 54554279 11 - TSS region transcription start site region 128594
Tssr128595 14 54554289 to 54554358 69 - TSS region transcription start site region 128595
Tssr128596 14 54554359 to 54554370 11 - TSS region transcription start site region 128596
Tssr128597 14 54554379 to 54554398 19 - TSS region transcription start site region 128597
Tssr128598 14 54554406 to 54554413 7 - TSS region transcription start site region 128598
Ajuba 14 54567472 to 54577558 10086 - protein coding gene ajuba LIM protein
Tssr128599 14 54568214 to 54568257 43 - TSS region transcription start site region 128599
Tssr128600 14 54572851 to 54572864 13 - TSS region transcription start site region 128600
Cpgi6463 14 54575365 to 54577746 2381 CpG island CpG island 6463
Tssr128601 14 54575666 to 54575708 42 - TSS region transcription start site region 128601
Tssr128602 14 54577480 to 54577498 18 - TSS region transcription start site region 128602
Tssr128603 14 54577527 to 54577539 12 - TSS region transcription start site region 128603
Tssr128604 14 54577543 to 54577558 15 - TSS region transcription start site region 128604
Tssr128605 14 54577561 to 54577577 16 - TSS region transcription start site region 128605
Tssr128606 14 54577578 to 54577612 34 - TSS region transcription start site region 128606
Gm24705 14 54581177 to 54581283 106 + snRNA gene predicted gene, 24705
4931414P19Rik 14 54583663 to 54605993 22330 - protein coding gene RIKEN cDNA 4931414P19 gene