Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:54433042-54494742

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mmp14 14 54431598 to 54442456 10858 + protein coding gene matrix metallopeptidase 14 (membrane-inserted)
Tssr125636 14 54436200 to 54436218 18 + TSS region transcription start site region 125636
Tssr125637 14 54436859 to 54436887 28 + TSS region transcription start site region 125637
Tssr125638 14 54437760 to 54437771 11 + TSS region transcription start site region 125638
Tssr128588 14 54438729 to 54438745 16 - TSS region transcription start site region 128588
Tssr125639 14 54439896 to 54439908 12 + TSS region transcription start site region 125639
Tssr125640 14 54440665 to 54440681 16 + TSS region transcription start site region 125640
Tssr125641 14 54440741 to 54440756 15 + TSS region transcription start site region 125641
Tssr125642 14 54440765 to 54440778 13 + TSS region transcription start site region 125642
Tssr125643 14 54440805 to 54440818 13 + TSS region transcription start site region 125643
Tssr125644 14 54440894 to 54440905 11 + TSS region transcription start site region 125644
Tssr125645 14 54440993 to 54441010 17 + TSS region transcription start site region 125645
Tssr125646 14 54441056 to 54441115 59 + TSS region transcription start site region 125646
Tssr125647 14 54441156 to 54441191 35 + TSS region transcription start site region 125647
Tssr125648 14 54442169 to 54442180 11 + TSS region transcription start site region 125648
Tssr125649 14 54442322 to 54442338 16 + TSS region transcription start site region 125649
5430430K15Rik 14 54446318 to 54447861 1543 + unclassified gene RIKEN cDNA 5430430K15 gene
Cpgi6457 14 54449166 to 54449544 378 CpG island CpG island 6457
Gm24424 14 54449958 to 54450064 106 - snRNA gene predicted gene, 24424
Tssr128589 14 54462796 to 54462799 3 - TSS region transcription start site region 128589
Gm10366 14 54463042 to 54464742 1700 - antisense lncRNA gene predicted gene 10366
Cpgi6458 14 54463865 to 54464965 1100 CpG island CpG island 6458
Tssr125650 14 54463898 to 54463912 14 + TSS region transcription start site region 125650
Tssr4410 14 54463915 to 54463926 11 + TSS region transcription start site region 4410
Tssr4411 14 54464030 to 54464050 20 - TSS region transcription start site region 4411
Tssr128590 14 54464053 to 54464067 14 - TSS region transcription start site region 128590
Tssr128591 14 54464069 to 54464083 14 - TSS region transcription start site region 128591
Tssr125651 14 54464141 to 54464222 81 + TSS region transcription start site region 125651
Lrp10 14 54464147 to 54470292 6145 + protein coding gene low-density lipoprotein receptor-related protein 10
Tssr125652 14 54464480 to 54464515 35 + TSS region transcription start site region 125652
Tssr125653 14 54467485 to 54467519 34 + TSS region transcription start site region 125653
Tssr125654 14 54467600 to 54467611 11 + TSS region transcription start site region 125654
Tssr125655 14 54467957 to 54467977 20 + TSS region transcription start site region 125655
Tssr125656 14 54468114 to 54468127 13 + TSS region transcription start site region 125656
Tssr125657 14 54469328 to 54469351 23 + TSS region transcription start site region 125657
Rem2 14 54476100 to 54480431 4331 + protein coding gene rad and gem related GTP binding protein 2
Tssr125658 14 54476183 to 54476190 7 + TSS region transcription start site region 125658
Cpgi6459 14 54476189 to 54476484 295 CpG island CpG island 6459
Tssr125659 14 54476212 to 54476228 16 + TSS region transcription start site region 125659
Tssr4412 14 54476246 to 54476259 13 + TSS region transcription start site region 4412
Cpgi6460 14 54479221 to 54479894 673 CpG island CpG island 6460
Gm41153 14 54492313 to 54492913 600 - lncRNA gene predicted gene, 41153