Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:54133253-54173264

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48 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tcrd 14 53946073 to 54159198 213125 + complex/cluster/region T cell receptor delta chain
Gm43434 14 54128298 to 54146287 17989 - antisense lncRNA gene predicted gene 43434
Tssr125540 14 54136740 to 54136750 10 + TSS region transcription start site region 125540
Trdj2 14 54136779 to 54136837 58 + gene segment T cell receptor delta joining 2
Tssr128535 14 54138261 to 54138286 25 - TSS region transcription start site region 128535
Tssr125541 14 54138492 to 54138537 45 + TSS region transcription start site region 125541
Trdc 14 54142851 to 54146108 3257 + gene segment T cell receptor delta, constant region
Trdv5 14 54148662 to 54149201 539 - gene segment T cell receptor delta variable 5
Tssr128536 14 54149221 to 54149240 19 - TSS region transcription start site region 128536
Tssr128537 14 54149248 to 54149259 11 - TSS region transcription start site region 128537
Tssr128538 14 54149261 to 54149280 19 - TSS region transcription start site region 128538
Tssr128539 14 54149335 to 54149343 8 - TSS region transcription start site region 128539
Tssr128540 14 54151399 to 54151410 11 - TSS region transcription start site region 128540
Tssr125542 14 54153146 to 54153164 18 + TSS region transcription start site region 125542
Tssr125543 14 54153190 to 54153200 10 + TSS region transcription start site region 125543
Tssr125544 14 54153206 to 54153231 25 + TSS region transcription start site region 125544
Tssr125545 14 54153253 to 54153264 11 + TSS region transcription start site region 125545
Traj61 14 54155005 to 54155076 71 + pseudogenic gene segment T cell receptor alpha joining 61
Traj60 14 54155933 to 54155985 52 + pseudogenic gene segment T cell receptor alpha joining 60
Traj59 14 54156133 to 54156194 61 + gene segment T cell receptor alpha joining 59
Tssr125546 14 54157267 to 54157274 7 + TSS region transcription start site region 125546
Traj58 14 54157280 to 54157342 62 + gene segment T cell receptor alpha joining 58
Tssr125547 14 54158456 to 54158467 11 + TSS region transcription start site region 125547
Traj57 14 54158507 to 54158569 62 + gene segment T cell receptor alpha joining 57
Tssr125548 14 54159028 to 54159035 7 + TSS region transcription start site region 125548
Traj56 14 54159263 to 54159325 62 + gene segment T cell receptor alpha joining 56
Traj55 14 54161439 to 54161501 62 + pseudogenic gene segment T cell receptor alpha joining 55
Traj54 14 54161990 to 54162043 53 + pseudogenic gene segment T cell receptor alpha joining 54
Traj53 14 54162644 to 54162709 65 + gene segment T cell receptor alpha joining 53
Traj52 14 54165316 to 54165381 65 + gene segment T cell receptor alpha joining 52
Traj51 14 54166239 to 54166281 42 + pseudogenic gene segment T cell receptor alpha joining 51
Tssr125549 14 54166521 to 54166546 25 + TSS region transcription start site region 125549
Tssr125550 14 54166549 to 54166576 27 + TSS region transcription start site region 125550
Traj50 14 54167590 to 54167652 62 + gene segment T cell receptor alpha joining 50
Tssr128541 14 54168016 to 54168019 3 - TSS region transcription start site region 128541
Tssr125551 14 54168550 to 54168561 11 + TSS region transcription start site region 125551
Tssr125552 14 54168596 to 54168605 9 + TSS region transcription start site region 125552
Tssr125553 14 54168642 to 54168653 11 + TSS region transcription start site region 125553
Tssr125554 14 54168655 to 54168683 28 + TSS region transcription start site region 125554
Traj49 14 54168686 to 54168744 58 + gene segment T cell receptor alpha joining 49
Traj48 14 54169808 to 54169868 60 + gene segment T cell receptor alpha joining 48
Tssr128542 14 54171350 to 54171356 6 - TSS region transcription start site region 128542
Tssr125555 14 54171575 to 54171582 7 + TSS region transcription start site region 125555
Tssr125556 14 54171800 to 54171811 11 + TSS region transcription start site region 125556
Traj47 14 54171802 to 54171856 54 + gene segment T cell receptor alpha joining 47
Tssr125557 14 54172109 to 54172112 3 + TSS region transcription start site region 125557
Traj46 14 54172338 to 54172398 60 + gene segment T cell receptor alpha joining 46
Traj45 14 54172831 to 54172890 59 + gene segment T cell receptor alpha joining 45