MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 14:53363388-53473873

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tcra-V2	14	53077312 to 53369494	292182		gene segment	T cell receptor alpha, variable 2
Trav13n-4	14	53362368 to 53364106	1738	+	gene segment	T cell receptor alpha variable 13N-4
D14Mit21	14	53368766 to 53369012	246		DNA segment	DNA segment, Chr 14, Massachusetts Institute of Technology 21
Tssr125477	14	53370013 to 53370025	12	+	TSS region	transcription start site region 125477
Trav14n-3	14	53370077 to 53370575	498	+	gene segment	T cell receptor alpha variable 14N-3
Trav15n-3	14	53375112 to 53375279	167	+	pseudogenic gene segment	T cell receptor alpha variable 15N-3
Trav7-2	14	53390633 to 53391136	503	+	gene segment	T cell receptor alpha variable 7-2
Tssr125478	14	53418352 to 53418393	41	+	TSS region	transcription start site region 125478
Trav4-2	14	53418388 to 53418873	485	+	gene segment	T cell receptor alpha variable 4-2
Tssr125479	14	53428708 to 53428721	13	+	TSS region	transcription start site region 125479
Trav6-3	14	53428761 to 53430377	1616	+	gene segment	T cell receptor alpha variable 6-3
Tssr125480	14	53443243 to 53443262	19	+	TSS region	transcription start site region 125480
Trav7-3	14	53443314 to 53443839	525	+	gene segment	T cell receptor alpha variable 7-3
Trav6-4	14	53454327 to 53454784	457	+	gene segment	T cell receptor alpha variable 6-4
Trav7-4	14	53461209 to 53461738	529	+	gene segment	T cell receptor alpha variable 7-4
Gm18711	14	53466079 to 53466828	749	+	pseudogene	predicted gene, 18711
Trav8-1	14	53469756 to 53470231	475	+	gene segment	T cell receptor alpha variable 8-1