Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:52982417-53089466

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16 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Trav9d-4 14 52983456 to 52983770 314 + gene segment T cell receptor alpha variable 9D-4
Trav4d-4 14 52990889 to 52991389 500 + gene segment T cell receptor alpha variable 4D-4
Gm43104 14 52992957 to 52993267 310 - pseudogene predicted gene 43104
Trav5d-4 14 53001713 to 53002231 518 + gene segment T cell receptor alpha variable 5D-4
Trav6d-7 14 53007632 to 53008098 466 + gene segment T cell receptor alpha variable 6D-7
C920008G01Rik 14 53020459 to 53020991 532 + unclassified gene RIKEN cDNA C920008G01 gene
Gm30214 14 53032417 to 53039466 7049 - antisense lncRNA gene predicted gene, 30214
Trav13d-3 14 53032902 to 53033419 517 + gene segment T cell receptor alpha variable 13D-3
Tssr125474 14 53042353 to 53042360 7 + TSS region transcription start site region 125474
Trav8d-2 14 53042428 to 53042891 463 + gene segment T cell receptor alpha variable 8D-2
Trav16d-dv11 14 53047287 to 53047821 534 + gene segment T cell receptor alpha variable 16D-DV11
Trav13d-4 14 53072763 to 53073274 511 + gene segment T cell receptor alpha variable 13D-4
Tcra-V2 14 53077312 to 53369494 292182 gene segment T cell receptor alpha, variable 2
Tssr125475 14 53078487 to 53078516 29 + TSS region transcription start site region 125475
Trav14d-3-dv8 14 53078547 to 53079045 498 + gene segment T cell receptor alpha variable 14D-3-DV8
Trav15d-3 14 53082354 to 53082520 166 + pseudogenic gene segment T cell receptor alpha variable 15D-3