Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:52189158-52299747

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Supt16 14 52160419 to 52197239 36820 - protein coding gene suppressor of Ty 16
Cpgi6441 14 52196521 to 52197724 1203 CpG island CpG island 6441
Tssr128500 14 52197150 to 52197173 23 - TSS region transcription start site region 128500
Tssr128501 14 52197182 to 52197207 25 - TSS region transcription start site region 128501
Tssr128502 14 52197216 to 52197267 51 - TSS region transcription start site region 128502
Tssr128503 14 52197405 to 52197465 60 - TSS region transcription start site region 128503
Gm26590 14 52197502 to 52213852 16350 + antisense lncRNA gene predicted gene, 26590
Tssr125456 14 52197511 to 52197518 7 + TSS region transcription start site region 125456
Chd8 14 52198151 to 52257780 59629 - protein coding gene chromodomain helicase DNA binding protein 8
Snord8 14 52209786 to 52209884 98 - snoRNA gene small nucleolar RNA, C/D box 8
Tssr128504 14 52235284 to 52235295 11 - TSS region transcription start site region 128504
Tssr128505 14 52237770 to 52237792 22 - TSS region transcription start site region 128505
Cpgi6442 14 52244158 to 52244747 589 CpG island CpG island 6442
Tssr128506 14 52244451 to 52244523 72 - TSS region transcription start site region 128506
Tssr128507 14 52256332 to 52256339 7 - TSS region transcription start site region 128507
Cpgi6443 14 52257354 to 52258120 766 CpG island CpG island 6443
Tssr128508 14 52257697 to 52257784 87 - TSS region transcription start site region 128508
Tssr128509 14 52257799 to 52257810 11 - TSS region transcription start site region 128509
Gm43766 14 52258811 to 52264227 5416 + unclassified gene predicted gene 43766
Rab2b 14 52261759 to 52279395 17636 - protein coding gene RAB2B, member RAS oncogene family
Tssr128510 14 52262870 to 52262898 28 - TSS region transcription start site region 128510
Tssr128511 14 52269174 to 52269195 21 - TSS region transcription start site region 128511
Gm23758 14 52276531 to 52276620 89 + snoRNA gene predicted gene, 23758
Cpgi6444 14 52278817 to 52280009 1192 CpG island CpG island 6444
Tssr128512 14 52279023 to 52279038 15 - TSS region transcription start site region 128512
Tssr125457 14 52279132 to 52279188 56 + TSS region transcription start site region 125457
Tox4 14 52279146 to 52295509 16363 + protein coding gene TOX high mobility group box family member 4
Tssr128513 14 52279238 to 52279339 101 - TSS region transcription start site region 128513
Tssr128514 14 52279346 to 52279359 13 - TSS region transcription start site region 128514
Tssr125458 14 52279581 to 52279630 49 + TSS region transcription start site region 125458
Mettl3 14 52294841 to 52305128 10287 - protein coding gene methyltransferase like 3
Tssr128515 14 52296431 to 52296435 4 - TSS region transcription start site region 128515