Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:52019300-52119369

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Zfp219 14 52006077 to 52020733 14656 - protein coding gene zinc finger protein 219
Tmem253 14 52015658 to 52019794 4136 + protein coding gene transmembrane protein 253
Cpgi6437 14 52019508 to 52020675 1167 CpG island CpG island 6437
Tssr128479 14 52019656 to 52019706 50 - TSS region transcription start site region 128479
Tssr128480 14 52019786 to 52019813 27 - TSS region transcription start site region 128480
Tssr128481 14 52020034 to 52020078 44 - TSS region transcription start site region 128481
Gm49086 14 52020076 to 52021908 1832 + antisense lncRNA gene predicted gene, 49086
Tssr128482 14 52020640 to 52020653 13 - TSS region transcription start site region 128482
Tssr128483 14 52020661 to 52020666 5 - TSS region transcription start site region 128483
Tssr128484 14 52020669 to 52020675 6 - TSS region transcription start site region 128484
Tssr128485 14 52020680 to 52020694 14 - TSS region transcription start site region 128485
Tssr128486 14 52020698 to 52020737 39 - TSS region transcription start site region 128486
Cpgi6438 14 52023211 to 52023463 252 CpG island CpG island 6438
Gm49256 14 52023284 to 52024108 824 + lincRNA gene predicted gene, 49256
Olfr221 14 52035174 to 52036109 935 - protein coding gene olfactory receptor 221
Tssr128487 14 52066161 to 52066169 8 - TSS region transcription start site region 128487
Gm22354 14 52069300 to 52069369 69 + snoRNA gene predicted gene, 22354
Gm8586 14 52069471 to 52070019 548 + pseudogene predicted gene 8586
Gm49258 14 52071523 to 52071927 404 - pseudogene predicted gene, 49258
Hnrnpc 14 52073380 to 52104028 30648 - protein coding gene heterogeneous nuclear ribonucleoprotein C
Tssr128488 14 52078030 to 52078035 5 - TSS region transcription start site region 128488
Tssr128489 14 52079526 to 52079543 17 - TSS region transcription start site region 128489
Tssr128490 14 52080193 to 52080198 5 - TSS region transcription start site region 128490
D930017J03Rik 14 52084592 to 52089687 5095 unclassified gene RIKEN cDNA D930017J03 gene
Tssr128491 14 52088822 to 52088827 5 - TSS region transcription start site region 128491
Tssr128492 14 52095801 to 52095805 4 - TSS region transcription start site region 128492
Cpgi6439 14 52103422 to 52104498 1076 CpG island CpG island 6439
Tssr128493 14 52103991 to 52104011 20 - TSS region transcription start site region 128493
Tssr128494 14 52104015 to 52104026 11 - TSS region transcription start site region 128494
Rpgrip1 14 52110704 to 52163546 52842 + protein coding gene retinitis pigmentosa GTPase regulator interacting protein 1
Tssr125448 14 52110910 to 52110932 22 + TSS region transcription start site region 125448
Tssr125449 14 52110939 to 52110953 14 + TSS region transcription start site region 125449
Cpgi6440 14 52119061 to 52119572 511 CpG island CpG island 6440