Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:51811280-52011315

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81 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
AY358078 14 51800046 to 51826359 26313 + protein coding gene cDNA sequence AY358078
Gm6047 14 51825720 to 51826293 573 + pseudogene predicted gene 6047
Gm27375 14 51837151 to 51837257 106 + miRNA gene predicted gene, 27375
Ear-ps5 14 51838999 to 51839461 462 + pseudogene eosinophil-associated, ribonuclease A family, pseudogene 5
Tssr125427 14 51853767 to 51853772 5 + TSS region transcription start site region 125427
Ear6 14 51853768 to 51854643 875 + protein coding gene eosinophil-associated, ribonuclease A family, member 6
Tssr128439 14 51870765 to 51870767 2 - TSS region transcription start site region 128439
Tssr128440 14 51877630 to 51877639 9 - TSS region transcription start site region 128440
Cpgi6427 14 51884658 to 51885427 769 CpG island CpG island 6427
Mettl17 14 51884842 to 51891868 7026 + protein coding gene methyltransferase like 17
Tssr125428 14 51884905 to 51884949 44 + TSS region transcription start site region 125428
Tssr125429 14 51884982 to 51884993 11 + TSS region transcription start site region 125429
Tssr125430 14 51885743 to 51885752 9 + TSS region transcription start site region 125430
Slc39a2 14 51893088 to 51896745 3657 + protein coding gene solute carrier family 39 (zinc transporter), member 2
Tssr125431 14 51893632 to 51893677 45 + TSS region transcription start site region 125431
Cpgi6428 14 51894957 to 51895297 340 CpG island CpG island 6428
Tssr4403 14 51895346 to 51895347 1 - TSS region transcription start site region 4403
Tssr125432 14 51902976 to 51902978 2 + TSS region transcription start site region 125432
Ndrg2 14 51905271 to 51914092 8821 - protein coding gene N-myc downstream regulated gene 2
Tssr128441 14 51905805 to 51905816 11 - TSS region transcription start site region 128441
Tssr125433 14 51908063 to 51908080 17 + TSS region transcription start site region 125433
Tssr125434 14 51908088 to 51908099 11 + TSS region transcription start site region 125434
Tssr128442 14 51908366 to 51908391 25 - TSS region transcription start site region 128442
Tssr128443 14 51908621 to 51908648 27 - TSS region transcription start site region 128443
Tssr128444 14 51908652 to 51908661 9 - TSS region transcription start site region 128444
Tssr128445 14 51910705 to 51910739 34 - TSS region transcription start site region 128445
Tssr128446 14 51910783 to 51910793 10 - TSS region transcription start site region 128446
Tssr128447 14 51911119 to 51911124 5 - TSS region transcription start site region 128447
Tssr128448 14 51911280 to 51911315 35 - TSS region transcription start site region 128448
Tssr128449 14 51911334 to 51911353 19 - TSS region transcription start site region 128449
Tssr128450 14 51911500 to 51911511 11 - TSS region transcription start site region 128450
Tssr128451 14 51911547 to 51911564 17 - TSS region transcription start site region 128451
Tssr128452 14 51911999 to 51912003 4 - TSS region transcription start site region 128452
Tssr128453 14 51912146 to 51912169 23 - TSS region transcription start site region 128453
Tssr128454 14 51912327 to 51912346 19 - TSS region transcription start site region 128454
Tssr128455 14 51912352 to 51912364 12 - TSS region transcription start site region 128455
Cpgi6429 14 51912937 to 51913969 1032 CpG island CpG island 6429
Tssr128456 14 51913348 to 51913391 43 - TSS region transcription start site region 128456
Tssr128457 14 51913393 to 51913398 5 - TSS region transcription start site region 128457
Tssr128458 14 51913570 to 51913577 7 - TSS region transcription start site region 128458
Tssr128459 14 51913945 to 51914012 67 - TSS region transcription start site region 128459
Tssr128460 14 51914065 to 51914076 11 - TSS region transcription start site region 128460
Tssr128461 14 51914091 to 51914102 11 - TSS region transcription start site region 128461
Tssr125435 14 51918418 to 51918430 12 + TSS region transcription start site region 125435
Tppp2 14 51918425 to 51920700 2275 + protein coding gene tubulin polymerization-promoting protein family member 2
Tssr125436 14 51918452 to 51918460 8 + TSS region transcription start site region 125436
Rnase13 14 51921362 to 51922773 1411 - protein coding gene ribonuclease, RNase A family, 13 (non-active)
Tssr128462 14 51922986 to 51922993 7 - TSS region transcription start site region 128462
Tssr128463 14 51923036 to 51923041 5 - TSS region transcription start site region 128463
Tssr128464 14 51923053 to 51923080 27 - TSS region transcription start site region 128464
Tssr4404 14 51923094 to 51923099 5 - TSS region transcription start site region 4404
Tssr4405 14 51923107 to 51923116 9 - TSS region transcription start site region 4405
Tssr4406 14 51923142 to 51923149 7 - TSS region transcription start site region 4406
Tssr128465 14 51923156 to 51923161 5 - TSS region transcription start site region 128465
Gm49076 14 51926264 to 51929660 3396 - lincRNA gene predicted gene, 49076
Gm19259 14 51950279 to 51950636 357 - pseudogene predicted gene, 19259
Cpgi6430 14 51984384 to 51985499 1115 CpG island CpG island 6430
Tssr125437 14 51984488 to 51984513 25 + TSS region transcription start site region 125437
Tssr125438 14 51984526 to 51984538 12 + TSS region transcription start site region 125438
Tssr125439 14 51984696 to 51984721 25 + TSS region transcription start site region 125439
Arhgef40 14 51984719 to 52006251 21532 + protein coding gene Rho guanine nucleotide exchange factor (GEF) 40
Tssr125440 14 51984826 to 51984856 30 + TSS region transcription start site region 125440
Tssr125441 14 51984857 to 51984908 51 + TSS region transcription start site region 125441
Cpgi6431 14 51985953 to 51986106 153 CpG island CpG island 6431
Gm16617 14 51986425 to 51988827 2402 - antisense lncRNA gene predicted gene, 16617
Tssr128466 14 51988832 to 51988837 5 - TSS region transcription start site region 128466
Cpgi6432 14 51989011 to 51989442 431 CpG island CpG island 6432
Tssr125442 14 51989037 to 51989064 27 + TSS region transcription start site region 125442
Cpgi6433 14 51996983 to 51997900 917 CpG island CpG island 6433
Zfp219 14 52006077 to 52020733 14656 - protein coding gene zinc finger protein 219
Cpgi6434 14 52006711 to 52007119 408 CpG island CpG island 6434
Cpgi6435 14 52008656 to 52009662 1006 CpG island CpG island 6435
Tssr128467 14 52008695 to 52008712 17 - TSS region transcription start site region 128467
Tssr128468 14 52008860 to 52008893 33 - TSS region transcription start site region 128468
Tssr128469 14 52008965 to 52008986 21 - TSS region transcription start site region 128469
Tssr128470 14 52009184 to 52009204 20 - TSS region transcription start site region 128470
Tssr128471 14 52009619 to 52009635 16 - TSS region transcription start site region 128471
Tssr128472 14 52009651 to 52009663 12 - TSS region transcription start site region 128472
D14Mit183 14 52010216 to 52010369 153 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 183
Tssr128473 14 52010848 to 52010863 15 - TSS region transcription start site region 128473
Tssr128474 14 52010868 to 52010905 37 - TSS region transcription start site region 128474