Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:50785177-51065235

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113 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ttc5 14 50765415 to 50785519 20104 - protein coding gene tetratricopeptide repeat domain 5
Cpgi6405 14 50785246 to 50785606 360 CpG island CpG island 6405
Gm48938 14 50787816 to 50788239 423 + pseudogene predicted gene, 48938
Ccnb1ip1 14 50789249 to 50795728 6479 - protein coding gene cyclin B1 interacting protein 1
Tssr128361 14 50795689 to 50795705 16 - TSS region transcription start site region 128361
Cpgi6406 14 50805007 to 50805230 223 CpG island CpG island 6406
Rpph1 14 50807449 to 50807767 318 - RNase P RNA gene ribonuclease P RNA component H1
Cpgi6407 14 50807484 to 50808091 607 CpG island CpG island 6407
Tssr125369 14 50807490 to 50807511 21 + TSS region transcription start site region 125369
Tssr128362 14 50807561 to 50807565 4 - TSS region transcription start site region 128362
Tssr128363 14 50807580 to 50807587 7 - TSS region transcription start site region 128363
Tssr128364 14 50807600 to 50807658 58 - TSS region transcription start site region 128364
Tssr128365 14 50807708 to 50807720 12 - TSS region transcription start site region 128365
Tssr128366 14 50807725 to 50807732 7 - TSS region transcription start site region 128366
Tssr128367 14 50807740 to 50807756 16 - TSS region transcription start site region 128367
Tssr128368 14 50807758 to 50807776 18 - TSS region transcription start site region 128368
Parp2 14 50807897 to 50821301 13404 + protein coding gene poly (ADP-ribose) polymerase family, member 2
Tssr125370 14 50807915 to 50807942 27 + TSS region transcription start site region 125370
Tep1 14 50824061 to 50870554 46493 - protein coding gene telomerase associated protein 1
Tssr128369 14 50826880 to 50826894 14 - TSS region transcription start site region 128369
Tssr128370 14 50826919 to 50826941 22 - TSS region transcription start site region 128370
Tssr128371 14 50830038 to 50830075 37 - TSS region transcription start site region 128371
Tssr128372 14 50833939 to 50833977 38 - TSS region transcription start site region 128372
Tssr128373 14 50834033 to 50834058 25 - TSS region transcription start site region 128373
Tssr125371 14 50834738 to 50834784 46 + TSS region transcription start site region 125371
Tssr128374 14 50835670 to 50835678 8 - TSS region transcription start site region 128374
Tssr128375 14 50836384 to 50836399 15 - TSS region transcription start site region 128375
Tssr128376 14 50836451 to 50836464 13 - TSS region transcription start site region 128376
Tssr125372 14 50839792 to 50839830 38 + TSS region transcription start site region 125372
Tssr128377 14 50840522 to 50840525 3 - TSS region transcription start site region 128377
Tssr128378 14 50851140 to 50851157 17 - TSS region transcription start site region 128378
Tssr128379 14 50869350 to 50869355 5 - TSS region transcription start site region 128379
Cpgi6408 14 50870277 to 50870488 211 CpG island CpG island 6408
Tssr125373 14 50870355 to 50870407 52 + TSS region transcription start site region 125373
Gm26782 14 50870469 to 50877205 6736 + antisense lncRNA gene predicted gene, 26782
Tssr128380 14 50870499 to 50870550 51 - TSS region transcription start site region 128380
Tssr128381 14 50870557 to 50870571 14 - TSS region transcription start site region 128381
2310007J06Rik 14 50888581 to 50890566 1985 unclassified non-coding RNA gene RIKEN cDNA 2310007J06 gene
Klhl33 14 50888582 to 50897507 8925 - protein coding gene kelch-like 33
Cpgi6409 14 50892441 to 50892942 501 CpG island CpG island 6409
Tssr125374 14 50896421 to 50896434 13 + TSS region transcription start site region 125374
Cpgi6410 14 50896485 to 50897020 535 CpG island CpG island 6410
Tssr128382 14 50897384 to 50897397 13 - TSS region transcription start site region 128382
Tssr128383 14 50897448 to 50897457 9 - TSS region transcription start site region 128383
Tssr128384 14 50897472 to 50897507 35 - TSS region transcription start site region 128384
Tssr128385 14 50897517 to 50897529 12 - TSS region transcription start site region 128385
Cpgi6411 14 50904135 to 50904441 306 CpG island CpG island 6411
Osgep 14 50915374 to 50924893 9519 - protein coding gene O-sialoglycoprotein endopeptidase
Tssr128386 14 50917322 to 50917336 14 - TSS region transcription start site region 128386
Gm24689 14 50918425 to 50918528 103 + snRNA gene predicted gene, 24689
Cpgi6412 14 50924521 to 50925425 904 CpG island CpG island 6412
Tssr128387 14 50924805 to 50924896 91 - TSS region transcription start site region 128387
Tssr125375 14 50924949 to 50924965 16 + TSS region transcription start site region 125375
Apex1 14 50924968 to 50927139 2171 + protein coding gene apurinic/apyrimidinic endonuclease 1
Tssr125376 14 50924971 to 50925004 33 + TSS region transcription start site region 125376
Tssr125377 14 50925016 to 50925027 11 + TSS region transcription start site region 125377
Tssr125378 14 50925177 to 50925235 58 + TSS region transcription start site region 125378
Tssr125379 14 50926708 to 50926741 33 + TSS region transcription start site region 125379
Pip4p1 14 50927215 to 50930877 3662 - protein coding gene phosphatidylinositol-4,5-bisphosphate 4-phosphatase 1
Tssr125380 14 50927215 to 50927219 4 + TSS region transcription start site region 125380
Tssr125381 14 50930104 to 50930137 33 + TSS region transcription start site region 125381
Cpgi6413 14 50930111 to 50931515 1404 CpG island CpG island 6413
Tssr125382 14 50930140 to 50930160 20 + TSS region transcription start site region 125382
Tssr128388 14 50930261 to 50930283 22 - TSS region transcription start site region 128388
Tssr128389 14 50930311 to 50930329 18 - TSS region transcription start site region 128389
Tssr128390 14 50930832 to 50930878 46 - TSS region transcription start site region 128390
Tssr128391 14 50930881 to 50930890 9 - TSS region transcription start site region 128391
Tssr128392 14 50939077 to 50939091 14 - TSS region transcription start site region 128392
Tssr4395 14 50943259 to 50943261 2 + TSS region transcription start site region 4395
Pnp 14 50944303 to 50953412 9109 + protein coding gene purine-nucleoside phosphorylase
Cpgi6414 14 50944373 to 50944804 431 CpG island CpG island 6414
Tssr125383 14 50944499 to 50944514 15 + TSS region transcription start site region 125383
Gm49342 14 50944517 to 50963136 18619 + protein coding gene predicted gene, 49342
Tssr125384 14 50944523 to 50944534 11 + TSS region transcription start site region 125384
Tssr125385 14 50947941 to 50947961 20 + TSS region transcription start site region 125385
Gm38316 14 50950559 to 50952004 1445 - unclassified gene predicted gene, 38316
Tssr125386 14 50951622 to 50951641 19 + TSS region transcription start site region 125386
Tssr125387 14 50952252 to 50952256 4 + TSS region transcription start site region 125387
Tssr125388 14 50952297 to 50952300 3 + TSS region transcription start site region 125388
Tssr125389 14 50956134 to 50956169 35 + TSS region transcription start site region 125389
Pnp2 14 50956141 to 50964751 8610 + protein coding gene purine-nucleoside phosphorylase 2
Tssr125390 14 50964920 to 50964931 11 + TSS region transcription start site region 125390
Gm8518 14 50978447 to 50978936 489 - pseudogene predicted gene 8518
Tssr128393 14 50987653 to 50987656 3 - TSS region transcription start site region 128393
Gm49038 14 50995713 to 50997075 1362 - pseudogene predicted gene, 49038
Rnase10 14 51007751 to 51010758 3007 + protein coding gene ribonuclease, RNase A family, 10 (non-active)
Tssr125391 14 51007911 to 51007920 9 + TSS region transcription start site region 125391
Tssr125392 14 51007941 to 51007948 7 + TSS region transcription start site region 125392
Tssr125393 14 51007950 to 51007975 25 + TSS region transcription start site region 125393
Tssr125394 14 51009016 to 51009027 11 + TSS region transcription start site region 125394
Rnase9 14 51038459 to 51041869 3410 - protein coding gene ribonuclease, RNase A family, 9 (non-active)
Tssr128394 14 51039363 to 51039369 6 - TSS region transcription start site region 128394
Tssr128395 14 51041861 to 51041879 18 - TSS region transcription start site region 128395
Tssr128396 14 51041923 to 51041928 5 - TSS region transcription start site region 128396
Tssr128397 14 51042050 to 51042072 22 - TSS region transcription start site region 128397
Rnase11 14 51049451 to 51050163 712 - protein coding gene ribonuclease, RNase A family, 11 (non-active)
Tssr128398 14 51050665 to 51050671 6 - TSS region transcription start site region 128398
Tssr125395 14 51053538 to 51053564 26 + TSS region transcription start site region 125395
Tssr128399 14 51055682 to 51055695 13 - TSS region transcription start site region 128399
Rnase12 14 51056698 to 51057242 544 - protein coding gene ribonuclease, RNase A family, 12 (non-active)
Tssr128400 14 51057261 to 51057288 27 - TSS region transcription start site region 128400
Tssr128401 14 51057466 to 51057473 7 - TSS region transcription start site region 128401
Tssr128402 14 51057480 to 51057487 7 - TSS region transcription start site region 128402
Tssr128403 14 51057595 to 51057606 11 - TSS region transcription start site region 128403
Tssr128404 14 51057611 to 51057628 17 - TSS region transcription start site region 128404
Tssr128405 14 51057639 to 51057667 28 - TSS region transcription start site region 128405
Tssr128406 14 51057674 to 51057689 15 - TSS region transcription start site region 128406
Tssr128407 14 51060876 to 51060880 4 - TSS region transcription start site region 128407
Cpgi6415 14 51063508 to 51064012 504 CpG island CpG island 6415
n-TLaag8 14 51063883 to 51063964 81 + tRNA gene nuclear encoded tRNA leucine 8 (anticodon AAG)
Cpgi6416 14 51064646 to 51065554 908 CpG island CpG island 6416
n-TPagg4 14 51064814 to 51064885 71 - tRNA gene nuclear encoded tRNA proline 4 (anticodon AGG)
n-TTtgt3 14 51065168 to 51065240 72 - tRNA gene nuclear encoded tRNA threonine 3 (anticodon TGT)