Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:50350388-50940670

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98 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr125365 14 50357885 to 50357898 13 + TSS region transcription start site region 125365
Tssr125366 14 50357904 to 50357916 12 + TSS region transcription start site region 125366
Tlr11 14 50357914 to 50363663 5749 + protein coding gene toll-like receptor 11
Tssr4393 14 50381284 to 50381294 10 - TSS region transcription start site region 4393
Tssr128358 14 50381300 to 50381311 11 - TSS region transcription start site region 128358
Tssr128359 14 50381361 to 50381392 31 - TSS region transcription start site region 128359
Olfr736 14 50392758 to 50393696 938 + protein coding gene olfactory receptor 736
Tssr4394 14 50397082 to 50397092 10 - TSS region transcription start site region 4394
Olfr737-ps1 14 50411178 to 50411460 282 - pseudogene olfactory receptor 737, pseudogene 1
Olfr738 14 50413546 to 50414481 935 + protein coding gene olfactory receptor 738
Olfr739 14 50424521 to 50425450 929 + protein coding gene olfactory receptor 739
Olfr740 14 50453054 to 50455678 2624 + protein coding gene olfactory receptor 740
Tssr125367 14 50466030 to 50466033 3 + TSS region transcription start site region 125367
Olfr741 14 50473057 to 50486395 13338 + protein coding gene olfactory receptor 741
4930413M19Rik 14 50503769 to 50520943 17174 + lncRNA gene RIKEN cDNA 4930413M19 gene
Olfr742 14 50515121 to 50516240 1119 + protein coding gene olfactory receptor 742
Olfr743 14 50533414 to 50534349 935 + protein coding gene olfactory receptor 743
Gm19109 14 50552868 to 50553828 960 + pseudogene predicted gene, 19109
Olfr744 14 50618224 to 50619195 971 + protein coding gene olfactory receptor 744
Olfr745 14 50642195 to 50643369 1174 + protein coding gene olfactory receptor 745
Gm45192 14 50645388 to 50645670 282 - pseudogene predicted gene 45192
Olfr746 14 50653239 to 50654183 944 + protein coding gene olfactory receptor 746
Gm18762 14 50670388 to 50672234 1846 + pseudogene predicted gene, 18762
Olfr747 14 50680691 to 50681645 954 - protein coding gene olfactory receptor 747
Olfr748 14 50710332 to 50711255 923 + protein coding gene olfactory receptor 748
Gm24316 14 50731053 to 50731159 106 + snRNA gene predicted gene, 24316
Olfr749 14 50736219 to 50744324 8105 - protein coding gene olfactory receptor 749
Ttc5 14 50765415 to 50785519 20104 - protein coding gene tetratricopeptide repeat domain 5
Tssr125368 14 50769205 to 50769207 2 + TSS region transcription start site region 125368
Gm10916 14 50769248 to 50769730 482 + pseudogene predicted gene 10916
Tssr128360 14 50781214 to 50781219 5 - TSS region transcription start site region 128360
Cpgi6405 14 50785246 to 50785606 360 CpG island CpG island 6405
Gm48938 14 50787816 to 50788239 423 + pseudogene predicted gene, 48938
Ccnb1ip1 14 50789249 to 50795728 6479 - protein coding gene cyclin B1 interacting protein 1
Tssr128361 14 50795689 to 50795705 16 - TSS region transcription start site region 128361
Cpgi6406 14 50805007 to 50805230 223 CpG island CpG island 6406
Rpph1 14 50807449 to 50807767 318 - RNase P RNA gene ribonuclease P RNA component H1
Cpgi6407 14 50807484 to 50808091 607 CpG island CpG island 6407
Tssr125369 14 50807490 to 50807511 21 + TSS region transcription start site region 125369
Tssr128362 14 50807561 to 50807565 4 - TSS region transcription start site region 128362
Tssr128363 14 50807580 to 50807587 7 - TSS region transcription start site region 128363
Tssr128364 14 50807600 to 50807658 58 - TSS region transcription start site region 128364
Tssr128365 14 50807708 to 50807720 12 - TSS region transcription start site region 128365
Tssr128366 14 50807725 to 50807732 7 - TSS region transcription start site region 128366
Tssr128367 14 50807740 to 50807756 16 - TSS region transcription start site region 128367
Tssr128368 14 50807758 to 50807776 18 - TSS region transcription start site region 128368
Parp2 14 50807897 to 50821301 13404 + protein coding gene poly (ADP-ribose) polymerase family, member 2
Tssr125370 14 50807915 to 50807942 27 + TSS region transcription start site region 125370
Tep1 14 50824061 to 50870554 46493 - protein coding gene telomerase associated protein 1
Tssr128369 14 50826880 to 50826894 14 - TSS region transcription start site region 128369
Tssr128370 14 50826919 to 50826941 22 - TSS region transcription start site region 128370
Tssr128371 14 50830038 to 50830075 37 - TSS region transcription start site region 128371
Tssr128372 14 50833939 to 50833977 38 - TSS region transcription start site region 128372
Tssr128373 14 50834033 to 50834058 25 - TSS region transcription start site region 128373
Tssr125371 14 50834738 to 50834784 46 + TSS region transcription start site region 125371
Tssr128374 14 50835670 to 50835678 8 - TSS region transcription start site region 128374
Tssr128375 14 50836384 to 50836399 15 - TSS region transcription start site region 128375
Tssr128376 14 50836451 to 50836464 13 - TSS region transcription start site region 128376
Tssr125372 14 50839792 to 50839830 38 + TSS region transcription start site region 125372
Tssr128377 14 50840522 to 50840525 3 - TSS region transcription start site region 128377
Tssr128378 14 50851140 to 50851157 17 - TSS region transcription start site region 128378
Tssr128379 14 50869350 to 50869355 5 - TSS region transcription start site region 128379
Cpgi6408 14 50870277 to 50870488 211 CpG island CpG island 6408
Tssr125373 14 50870355 to 50870407 52 + TSS region transcription start site region 125373
Gm26782 14 50870469 to 50877205 6736 + antisense lncRNA gene predicted gene, 26782
Tssr128380 14 50870499 to 50870550 51 - TSS region transcription start site region 128380
Tssr128381 14 50870557 to 50870571 14 - TSS region transcription start site region 128381
2310007J06Rik 14 50888581 to 50890566 1985 unclassified non-coding RNA gene RIKEN cDNA 2310007J06 gene
Klhl33 14 50888582 to 50897507 8925 - protein coding gene kelch-like 33
Cpgi6409 14 50892441 to 50892942 501 CpG island CpG island 6409
Tssr125374 14 50896421 to 50896434 13 + TSS region transcription start site region 125374
Cpgi6410 14 50896485 to 50897020 535 CpG island CpG island 6410
Tssr128382 14 50897384 to 50897397 13 - TSS region transcription start site region 128382
Tssr128383 14 50897448 to 50897457 9 - TSS region transcription start site region 128383
Tssr128384 14 50897472 to 50897507 35 - TSS region transcription start site region 128384
Tssr128385 14 50897517 to 50897529 12 - TSS region transcription start site region 128385
Cpgi6411 14 50904135 to 50904441 306 CpG island CpG island 6411
Osgep 14 50915374 to 50924893 9519 - protein coding gene O-sialoglycoprotein endopeptidase
Tssr128386 14 50917322 to 50917336 14 - TSS region transcription start site region 128386
Gm24689 14 50918425 to 50918528 103 + snRNA gene predicted gene, 24689
Cpgi6412 14 50924521 to 50925425 904 CpG island CpG island 6412
Tssr128387 14 50924805 to 50924896 91 - TSS region transcription start site region 128387
Tssr125375 14 50924949 to 50924965 16 + TSS region transcription start site region 125375
Apex1 14 50924968 to 50927139 2171 + protein coding gene apurinic/apyrimidinic endonuclease 1
Tssr125376 14 50924971 to 50925004 33 + TSS region transcription start site region 125376
Tssr125377 14 50925016 to 50925027 11 + TSS region transcription start site region 125377
Tssr125378 14 50925177 to 50925235 58 + TSS region transcription start site region 125378
Tssr125379 14 50926708 to 50926741 33 + TSS region transcription start site region 125379
Tssr125380 14 50927215 to 50927219 4 + TSS region transcription start site region 125380
Pip4p1 14 50927215 to 50930877 3662 - protein coding gene phosphatidylinositol-4,5-bisphosphate 4-phosphatase 1
Tssr125381 14 50930104 to 50930137 33 + TSS region transcription start site region 125381
Cpgi6413 14 50930111 to 50931515 1404 CpG island CpG island 6413
Tssr125382 14 50930140 to 50930160 20 + TSS region transcription start site region 125382
Tssr128388 14 50930261 to 50930283 22 - TSS region transcription start site region 128388
Tssr128389 14 50930311 to 50930329 18 - TSS region transcription start site region 128389
Tssr128390 14 50930832 to 50930878 46 - TSS region transcription start site region 128390
Tssr128391 14 50930881 to 50930890 9 - TSS region transcription start site region 128391
Tssr128392 14 50939077 to 50939091 14 - TSS region transcription start site region 128392