Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:30655442-31105453

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121 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rft1 14 30654360 to 30691317 36957 + protein coding gene RFT1 homolog
Tssr124848 14 30677273 to 30677278 5 + TSS region transcription start site region 124848
Cpgi6276 14 30714793 to 30716865 2072 CpG island CpG island 6276
Sfmbt1 14 30714849 to 30822721 107872 + protein coding gene Scm-like with four mbt domains 1
Tssr124849 14 30715599 to 30715641 42 + TSS region transcription start site region 124849
Tssr124850 14 30715646 to 30715664 18 + TSS region transcription start site region 124850
Tssr124851 14 30715688 to 30715741 53 + TSS region transcription start site region 124851
Tssr124852 14 30715782 to 30715794 12 + TSS region transcription start site region 124852
Tssr124853 14 30716377 to 30716415 38 + TSS region transcription start site region 124853
Tssr124854 14 30716878 to 30716882 4 + TSS region transcription start site region 124854
Tssr127889 14 30716923 to 30716955 32 - TSS region transcription start site region 127889
Tssr124855 14 30719828 to 30719832 4 + TSS region transcription start site region 124855
Tssr124856 14 30732877 to 30732882 5 + TSS region transcription start site region 124856
Tssr124857 14 30743803 to 30743808 5 + TSS region transcription start site region 124857
1700087M22Rik 14 30770681 to 30778004 7323 - antisense lncRNA gene RIKEN cDNA 1700087M22 gene
Gm15667 14 30804379 to 30805160 781 + pseudogene predicted gene 15667
Tssr124858 14 30819172 to 30819197 25 + TSS region transcription start site region 124858
Cpgi6277 14 30825285 to 30826323 1038 CpG island CpG island 6277
Tssr124859 14 30825568 to 30825574 6 + TSS region transcription start site region 124859
Tssr124860 14 30825580 to 30825640 60 + TSS region transcription start site region 124860
Stimate 14 30825594 to 30877210 51616 + protein coding gene STIM activating enhancer
Tssr124861 14 30825657 to 30825665 8 + TSS region transcription start site region 124861
Tssr124862 14 30825667 to 30825677 10 + TSS region transcription start site region 124862
Tssr124863 14 30825825 to 30825857 32 + TSS region transcription start site region 124863
Tssr124864 14 30870628 to 30870633 5 + TSS region transcription start site region 124864
Tssr124865 14 30870635 to 30870646 11 + TSS region transcription start site region 124865
Tssr124866 14 30870662 to 30870668 6 + TSS region transcription start site region 124866
Mustn1 14 30879257 to 30881610 2353 + protein coding gene musculoskeletal, embryonic nuclear protein 1
Tssr124867 14 30879316 to 30879327 11 + TSS region transcription start site region 124867
Tssr124868 14 30879533 to 30879549 16 + TSS region transcription start site region 124868
Tssr124869 14 30880114 to 30880146 32 + TSS region transcription start site region 124869
Tssr124870 14 30880248 to 30880257 9 + TSS region transcription start site region 124870
Tssr124871 14 30880442 to 30880453 11 + TSS region transcription start site region 124871
Tssr124872 14 30880486 to 30880499 13 + TSS region transcription start site region 124872
Tssr124873 14 30881085 to 30881100 15 + TSS region transcription start site region 124873
Tssr124874 14 30886411 to 30886424 13 + TSS region transcription start site region 124874
Tssr124875 14 30886458 to 30886483 25 + TSS region transcription start site region 124875
Itih4 14 30886476 to 30901986 15510 + protein coding gene inter alpha-trypsin inhibitor, heavy chain 4
Tssr124876 14 30886493 to 30886510 17 + TSS region transcription start site region 124876
Tssr124877 14 30886521 to 30886532 11 + TSS region transcription start site region 124877
Tssr124878 14 30889612 to 30889623 11 + TSS region transcription start site region 124878
Tssr124879 14 30889894 to 30889904 10 + TSS region transcription start site region 124879
Tssr124880 14 30890161 to 30890169 8 + TSS region transcription start site region 124880
Tssr124881 14 30890644 to 30890670 26 + TSS region transcription start site region 124881
Tssr127890 14 30890689 to 30890733 44 - TSS region transcription start site region 127890
Tssr124882 14 30891399 to 30891417 18 + TSS region transcription start site region 124882
Tssr124883 14 30891706 to 30891746 40 + TSS region transcription start site region 124883
Tssr124884 14 30892031 to 30892052 21 + TSS region transcription start site region 124884
Tssr124885 14 30892338 to 30892357 19 + TSS region transcription start site region 124885
Tssr124886 14 30892574 to 30892588 14 + TSS region transcription start site region 124886
Tssr124887 14 30892604 to 30892615 11 + TSS region transcription start site region 124887
Tssr124888 14 30892673 to 30892691 18 + TSS region transcription start site region 124888
Tssr124889 14 30895400 to 30895412 12 + TSS region transcription start site region 124889
Tssr124890 14 30895430 to 30895448 18 + TSS region transcription start site region 124890
Tssr124891 14 30895464 to 30895484 20 + TSS region transcription start site region 124891
Tssr124892 14 30896598 to 30896636 38 + TSS region transcription start site region 124892
Tssr124893 14 30896925 to 30896935 10 + TSS region transcription start site region 124893
Tssr124894 14 30898711 to 30898741 30 + TSS region transcription start site region 124894
Tssr124895 14 30898748 to 30898757 9 + TSS region transcription start site region 124895
Itih3 14 30908572 to 30923755 15183 - protein coding gene inter-alpha trypsin inhibitor, heavy chain 3
Tssr127891 14 30912688 to 30912694 6 - TSS region transcription start site region 127891
Tssr127892 14 30912710 to 30912725 15 - TSS region transcription start site region 127892
Tssr127893 14 30914126 to 30914151 25 - TSS region transcription start site region 127893
Tssr127894 14 30915477 to 30915481 4 - TSS region transcription start site region 127894
Tssr127895 14 30915716 to 30915736 20 - TSS region transcription start site region 127895
Tssr127896 14 30915764 to 30915773 9 - TSS region transcription start site region 127896
Tssr127897 14 30917356 to 30917367 11 - TSS region transcription start site region 127897
Tssr127898 14 30919406 to 30919419 13 - TSS region transcription start site region 127898
Tssr127899 14 30920741 to 30920751 10 - TSS region transcription start site region 127899
Tssr127900 14 30921739 to 30921763 24 - TSS region transcription start site region 127900
Tssr127901 14 30921977 to 30921992 15 - TSS region transcription start site region 127901
Tssr127902 14 30923547 to 30923565 18 - TSS region transcription start site region 127902
Tssr127903 14 30923754 to 30923765 11 - TSS region transcription start site region 127903
Itih1 14 30929180 to 30943289 14109 - protein coding gene inter-alpha trypsin inhibitor, heavy chain 1
Tssr127904 14 30938068 to 30938090 22 - TSS region transcription start site region 127904
Tssr127905 14 30943275 to 30943294 19 - TSS region transcription start site region 127905
Gm41121 14 30950432 to 30951287 855 - lncRNA gene predicted gene, 41121
Cpgi6278 14 30951045 to 30951947 902 CpG island CpG island 6278
Tssr127906 14 30951255 to 30951289 34 - TSS region transcription start site region 127906
Nek4 14 30951377 to 30988821 37444 + protein coding gene NIMA (never in mitosis gene a)-related expressed kinase 4
Tssr124896 14 30951406 to 30951415 9 + TSS region transcription start site region 124896
Tssr124897 14 30951431 to 30951450 19 + TSS region transcription start site region 124897
Tssr124898 14 30951452 to 30951469 17 + TSS region transcription start site region 124898
Tssr124899 14 30951487 to 30951510 23 + TSS region transcription start site region 124899
Tssr124900 14 30951531 to 30951542 11 + TSS region transcription start site region 124900
Spcs1 14 30999826 to 31001666 1840 - protein coding gene signal peptidase complex subunit 1 homolog (S. cerevisiae)
Tssr127907 14 31000963 to 31000976 13 - TSS region transcription start site region 127907
Tssr127908 14 31001010 to 31001037 27 - TSS region transcription start site region 127908
Cpgi6279 14 31001073 to 31002202 1129 CpG island CpG island 6279
Tssr127909 14 31001311 to 31001388 77 - TSS region transcription start site region 127909
Tssr124901 14 31001383 to 31001407 24 + TSS region transcription start site region 124901
Glt8d1 14 31001400 to 31011991 10591 + protein coding gene glycosyltransferase 8 domain containing 1
Tssr124902 14 31001414 to 31001464 50 + TSS region transcription start site region 124902
Tssr127910 14 31001532 to 31001587 55 - TSS region transcription start site region 127910
Tssr127911 14 31001588 to 31001620 32 - TSS region transcription start site region 127911
Tssr124903 14 31001602 to 31001628 26 + TSS region transcription start site region 124903
Tssr124904 14 31001630 to 31001713 83 + TSS region transcription start site region 124904
Tssr124905 14 31001843 to 31001920 77 + TSS region transcription start site region 124905
Tssr4364 14 31001939 to 31001950 11 + TSS region transcription start site region 4364
Gnl3 14 31012433 to 31019131 6698 - protein coding gene guanine nucleotide binding protein-like 3 (nucleolar)
Tssr127912 14 31014227 to 31014231 4 - TSS region transcription start site region 127912
Snord69 14 31014293 to 31014351 58 - snoRNA gene small nucleolar RNA, C/D box 69
Tssr127913 14 31014356 to 31014360 4 - TSS region transcription start site region 127913
Gm24916 14 31015148 to 31015226 78 - snoRNA gene predicted gene, 24916
Snord19 14 31016219 to 31016272 53 - snoRNA gene small nucleolar RNA, C/D box 19
Cpgi6280 14 31018666 to 31019655 989 CpG island CpG island 6280
Tssr127914 14 31019004 to 31019042 38 - TSS region transcription start site region 127914
Tssr127915 14 31019055 to 31019069 14 - TSS region transcription start site region 127915
Tssr124906 14 31019125 to 31019157 32 + TSS region transcription start site region 124906
Pbrm1 14 31019138 to 31121592 102454 + protein coding gene polybromo 1
Tssr124907 14 31019159 to 31019178 19 + TSS region transcription start site region 124907
Tssr124908 14 31019183 to 31019214 31 + TSS region transcription start site region 124908
Tssr127916 14 31019345 to 31019411 66 - TSS region transcription start site region 127916
Tssr124909 14 31019439 to 31019506 67 + TSS region transcription start site region 124909
Tssr124910 14 31019700 to 31019704 4 + TSS region transcription start site region 124910
Tssr124911 14 31030640 to 31030645 5 + TSS region transcription start site region 124911
Gm49094 14 31042317 to 31043120 803 - pseudogene predicted gene, 49094
Tssr124912 14 31072159 to 31072163 4 + TSS region transcription start site region 124912
Gm5459 14 31076638 to 31077435 797 - pseudogene predicted gene 5459
Smim4 14 31088127 to 31128930 40803 - protein coding gene small integral membrane protein 4
Tssr124913 14 31093500 to 31093504 4 + TSS region transcription start site region 124913