MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 14:30431488-30551506

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cacna1d	14	30039941 to 30491156	451215	-	protein coding gene	calcium channel, voltage-dependent, L type, alpha 1D subunit
Tssr127857	14	30434098 to 30434115	17	-	TSS region	transcription start site region 127857
4831407H17Rik	14	30458036 to 30463282	5246	+	lncRNA gene	RIKEN cDNA 4831407H17 gene
Tssr127858	14	30469872 to 30469883	11	-	TSS region	transcription start site region 127858
Tssr127859	14	30469886 to 30469895	9	-	TSS region	transcription start site region 127859
Tssr127860	14	30469899 to 30469911	12	-	TSS region	transcription start site region 127860
Cpgi6272	14	30479255 to 30480115	860		CpG island	CpG island 6272
Dcp1a	14	30479535 to 30527063	47528	+	protein coding gene	decapping mRNA 1A
Tssr124825	14	30479620 to 30479685	65	+	TSS region	transcription start site region 124825
Gm35566	14	30484594 to 30488591	3997	+	lncRNA gene	predicted gene, 35566
Tssr124826	14	30485071 to 30485087	16	+	TSS region	transcription start site region 124826
Tssr4361	14	30485098 to 30485107	9	+	TSS region	transcription start site region 4361
Tssr127861	14	30491451 to 30491458	7	-	TSS region	transcription start site region 127861
Tssr127862	14	30491488 to 30491506	18	-	TSS region	transcription start site region 127862
Cpgi6273	14	30548980 to 30550090	1110		CpG island	CpG island 6273
Tkt	14	30549131 to 30574724	25593	+	protein coding gene	transketolase
Tssr124827	14	30549139 to 30549159	20	+	TSS region	transcription start site region 124827
Tssr124828	14	30549163 to 30549188	25	+	TSS region	transcription start site region 124828