Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:30370689-31410733

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299 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Appd2 14 16523711 to 30392905 13869194 QTL APP associated premature death 2
Cacna1d 14 30039941 to 30491156 451215 - protein coding gene calcium channel, voltage-dependent, L type, alpha 1D subunit
Tssr127856 14 30378412 to 30378417 5 - TSS region transcription start site region 127856
Gm18072 14 30383806 to 30384354 548 - pseudogene predicted gene, 18072
D14Mit127 14 30392757 to 30392905 148 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 127
Gm47576 14 30397994 to 30398443 449 + pseudogene predicted gene, 47576
Gm7621 14 30402002 to 30402988 986 + pseudogene predicted gene 7621
Cpgi6271 14 30416879 to 30417083 204 CpG island CpG island 6271
Gm18681 14 30423265 to 30423873 608 + pseudogene predicted gene, 18681
Tssr127857 14 30434098 to 30434115 17 - TSS region transcription start site region 127857
4831407H17Rik 14 30458036 to 30463282 5246 + lncRNA gene RIKEN cDNA 4831407H17 gene
Tssr127858 14 30469872 to 30469883 11 - TSS region transcription start site region 127858
Tssr127859 14 30469886 to 30469895 9 - TSS region transcription start site region 127859
Tssr127860 14 30469899 to 30469911 12 - TSS region transcription start site region 127860
Cpgi6272 14 30479255 to 30480115 860 CpG island CpG island 6272
Dcp1a 14 30479535 to 30527063 47528 + protein coding gene decapping mRNA 1A
Tssr124825 14 30479620 to 30479685 65 + TSS region transcription start site region 124825
Gm35566 14 30484594 to 30488591 3997 + lncRNA gene predicted gene, 35566
Tssr124826 14 30485071 to 30485087 16 + TSS region transcription start site region 124826
Tssr4361 14 30485098 to 30485107 9 + TSS region transcription start site region 4361
Tssr127861 14 30491451 to 30491458 7 - TSS region transcription start site region 127861
Tssr127862 14 30491488 to 30491506 18 - TSS region transcription start site region 127862
Cpgi6273 14 30548980 to 30550090 1110 CpG island CpG island 6273
Tkt 14 30549131 to 30574724 25593 + protein coding gene transketolase
Tssr124827 14 30549139 to 30549159 20 + TSS region transcription start site region 124827
Tssr124828 14 30549163 to 30549188 25 + TSS region transcription start site region 124828
Tssr124829 14 30558711 to 30558728 17 + TSS region transcription start site region 124829
Tssr124830 14 30558787 to 30558805 18 + TSS region transcription start site region 124830
Tssr124831 14 30559780 to 30559799 19 + TSS region transcription start site region 124831
Tssr124832 14 30565509 to 30565561 52 + TSS region transcription start site region 124832
Tssr124833 14 30565606 to 30565635 29 + TSS region transcription start site region 124833
Tssr124834 14 30568176 to 30568209 33 + TSS region transcription start site region 124834
Tssr124835 14 30570958 to 30570975 17 + TSS region transcription start site region 124835
Mir3076 14 30572149 to 30572208 59 + miRNA gene microRNA 3076
Tssr127863 14 30573609 to 30573611 2 - TSS region transcription start site region 127863
Tssr124836 14 30593435 to 30593446 11 + TSS region transcription start site region 124836
Prkcd 14 30595354 to 30626210 30856 - protein coding gene protein kinase C, delta
Tssr127864 14 30595709 to 30595727 18 - TSS region transcription start site region 127864
Tssr127865 14 30595748 to 30595782 34 - TSS region transcription start site region 127865
Tssr124837 14 30595986 to 30596002 16 + TSS region transcription start site region 124837
Tssr127866 14 30596542 to 30596546 4 - TSS region transcription start site region 127866
Tssr124838 14 30596641 to 30596659 18 + TSS region transcription start site region 124838
Tssr127867 14 30599364 to 30599383 19 - TSS region transcription start site region 127867
Tssr127868 14 30599417 to 30599432 15 - TSS region transcription start site region 127868
Tssr127869 14 30599486 to 30599500 14 - TSS region transcription start site region 127869
Tssr127870 14 30604936 to 30604983 47 - TSS region transcription start site region 127870
Tssr127871 14 30605166 to 30605175 9 - TSS region transcription start site region 127871
Tssr4362 14 30605841 to 30605909 68 - TSS region transcription start site region 4362
Tssr127872 14 30606697 to 30606713 16 - TSS region transcription start site region 127872
Tssr4363 14 30607769 to 30607774 5 - TSS region transcription start site region 4363
Tssr127873 14 30607779 to 30607804 25 - TSS region transcription start site region 127873
Tssr127874 14 30607808 to 30607821 13 - TSS region transcription start site region 127874
Tssr127875 14 30607823 to 30607824 1 - TSS region transcription start site region 127875
Tssr124839 14 30607911 to 30607923 12 + TSS region transcription start site region 124839
Tssr127876 14 30609145 to 30609177 32 - TSS region transcription start site region 127876
Tssr127877 14 30616851 to 30616861 10 - TSS region transcription start site region 127877
Tssr127878 14 30618133 to 30618135 2 - TSS region transcription start site region 127878
Tssr127879 14 30622161 to 30622168 7 - TSS region transcription start site region 127879
Tssr127880 14 30625033 to 30625062 29 - TSS region transcription start site region 127880
Tssr127881 14 30625095 to 30625105 10 - TSS region transcription start site region 127881
Tssr127882 14 30625126 to 30625137 11 - TSS region transcription start site region 127882
Tssr127883 14 30625143 to 30625158 15 - TSS region transcription start site region 127883
Cpgi6274 14 30625252 to 30626698 1446 CpG island CpG island 6274
Tssr127884 14 30625318 to 30625339 21 - TSS region transcription start site region 127884
Tssr127885 14 30625450 to 30625482 32 - TSS region transcription start site region 127885
Tssr127886 14 30625895 to 30625937 42 - TSS region transcription start site region 127886
Tssr127887 14 30626196 to 30626220 24 - TSS region transcription start site region 127887
Tssr124840 14 30626334 to 30626359 25 + TSS region transcription start site region 124840
Tssr127888 14 30626410 to 30626427 17 - TSS region transcription start site region 127888
Tssr124841 14 30626597 to 30626603 6 + TSS region transcription start site region 124841
Tssr124842 14 30626646 to 30626653 7 + TSS region transcription start site region 124842
Gm46446 14 30628609 to 30639241 10632 + lncRNA gene predicted gene, 46446
Tssr124843 14 30631412 to 30631424 12 + TSS region transcription start site region 124843
Tssr124844 14 30635448 to 30635466 18 + TSS region transcription start site region 124844
Tssr124845 14 30635499 to 30635549 50 + TSS region transcription start site region 124845
Gm7644 14 30636160 to 30654077 17917 + lincRNA gene predicted gene 7644
Cpgi6275 14 30654256 to 30654683 427 CpG island CpG island 6275
Tssr124846 14 30654342 to 30654364 22 + TSS region transcription start site region 124846
Rft1 14 30654360 to 30691317 36957 + protein coding gene RFT1 homolog
Tssr124847 14 30654367 to 30654424 57 + TSS region transcription start site region 124847
Tssr124848 14 30677273 to 30677278 5 + TSS region transcription start site region 124848
Cpgi6276 14 30714793 to 30716865 2072 CpG island CpG island 6276
Sfmbt1 14 30714849 to 30822721 107872 + protein coding gene Scm-like with four mbt domains 1
Tssr124849 14 30715599 to 30715641 42 + TSS region transcription start site region 124849
Tssr124850 14 30715646 to 30715664 18 + TSS region transcription start site region 124850
Tssr124851 14 30715688 to 30715741 53 + TSS region transcription start site region 124851
Tssr124852 14 30715782 to 30715794 12 + TSS region transcription start site region 124852
Tssr124853 14 30716377 to 30716415 38 + TSS region transcription start site region 124853
Tssr124854 14 30716878 to 30716882 4 + TSS region transcription start site region 124854
Tssr127889 14 30716923 to 30716955 32 - TSS region transcription start site region 127889
Tssr124855 14 30719828 to 30719832 4 + TSS region transcription start site region 124855
Tssr124856 14 30732877 to 30732882 5 + TSS region transcription start site region 124856
Tssr124857 14 30743803 to 30743808 5 + TSS region transcription start site region 124857
1700087M22Rik 14 30770681 to 30778004 7323 - antisense lncRNA gene RIKEN cDNA 1700087M22 gene
Gm15667 14 30804379 to 30805160 781 + pseudogene predicted gene 15667
Tssr124858 14 30819172 to 30819197 25 + TSS region transcription start site region 124858
Cpgi6277 14 30825285 to 30826323 1038 CpG island CpG island 6277
Tssr124859 14 30825568 to 30825574 6 + TSS region transcription start site region 124859
Tssr124860 14 30825580 to 30825640 60 + TSS region transcription start site region 124860
Stimate 14 30825594 to 30877210 51616 + protein coding gene STIM activating enhancer
Tssr124861 14 30825657 to 30825665 8 + TSS region transcription start site region 124861
Tssr124862 14 30825667 to 30825677 10 + TSS region transcription start site region 124862
Tssr124863 14 30825825 to 30825857 32 + TSS region transcription start site region 124863
Tssr124864 14 30870628 to 30870633 5 + TSS region transcription start site region 124864
Tssr124865 14 30870635 to 30870646 11 + TSS region transcription start site region 124865
Tssr124866 14 30870662 to 30870668 6 + TSS region transcription start site region 124866
Mustn1 14 30879257 to 30881610 2353 + protein coding gene musculoskeletal, embryonic nuclear protein 1
Tssr124867 14 30879316 to 30879327 11 + TSS region transcription start site region 124867
Tssr124868 14 30879533 to 30879549 16 + TSS region transcription start site region 124868
Tssr124869 14 30880114 to 30880146 32 + TSS region transcription start site region 124869
Tssr124870 14 30880248 to 30880257 9 + TSS region transcription start site region 124870
Tssr124871 14 30880442 to 30880453 11 + TSS region transcription start site region 124871
Tssr124872 14 30880486 to 30880499 13 + TSS region transcription start site region 124872
Tssr124873 14 30881085 to 30881100 15 + TSS region transcription start site region 124873
Tssr124874 14 30886411 to 30886424 13 + TSS region transcription start site region 124874
Tssr124875 14 30886458 to 30886483 25 + TSS region transcription start site region 124875
Itih4 14 30886476 to 30901986 15510 + protein coding gene inter alpha-trypsin inhibitor, heavy chain 4
Tssr124876 14 30886493 to 30886510 17 + TSS region transcription start site region 124876
Tssr124877 14 30886521 to 30886532 11 + TSS region transcription start site region 124877
Tssr124878 14 30889612 to 30889623 11 + TSS region transcription start site region 124878
Tssr124879 14 30889894 to 30889904 10 + TSS region transcription start site region 124879
Tssr124880 14 30890161 to 30890169 8 + TSS region transcription start site region 124880
Tssr124881 14 30890644 to 30890670 26 + TSS region transcription start site region 124881
Tssr127890 14 30890689 to 30890733 44 - TSS region transcription start site region 127890
Tssr124882 14 30891399 to 30891417 18 + TSS region transcription start site region 124882
Tssr124883 14 30891706 to 30891746 40 + TSS region transcription start site region 124883
Tssr124884 14 30892031 to 30892052 21 + TSS region transcription start site region 124884
Tssr124885 14 30892338 to 30892357 19 + TSS region transcription start site region 124885
Tssr124886 14 30892574 to 30892588 14 + TSS region transcription start site region 124886
Tssr124887 14 30892604 to 30892615 11 + TSS region transcription start site region 124887
Tssr124888 14 30892673 to 30892691 18 + TSS region transcription start site region 124888
Tssr124889 14 30895400 to 30895412 12 + TSS region transcription start site region 124889
Tssr124890 14 30895430 to 30895448 18 + TSS region transcription start site region 124890
Tssr124891 14 30895464 to 30895484 20 + TSS region transcription start site region 124891
Tssr124892 14 30896598 to 30896636 38 + TSS region transcription start site region 124892
Tssr124893 14 30896925 to 30896935 10 + TSS region transcription start site region 124893
Tssr124894 14 30898711 to 30898741 30 + TSS region transcription start site region 124894
Tssr124895 14 30898748 to 30898757 9 + TSS region transcription start site region 124895
Itih3 14 30908572 to 30923755 15183 - protein coding gene inter-alpha trypsin inhibitor, heavy chain 3
Tssr127891 14 30912688 to 30912694 6 - TSS region transcription start site region 127891
Tssr127892 14 30912710 to 30912725 15 - TSS region transcription start site region 127892
Tssr127893 14 30914126 to 30914151 25 - TSS region transcription start site region 127893
Tssr127894 14 30915477 to 30915481 4 - TSS region transcription start site region 127894
Tssr127895 14 30915716 to 30915736 20 - TSS region transcription start site region 127895
Tssr127896 14 30915764 to 30915773 9 - TSS region transcription start site region 127896
Tssr127897 14 30917356 to 30917367 11 - TSS region transcription start site region 127897
Tssr127898 14 30919406 to 30919419 13 - TSS region transcription start site region 127898
Tssr127899 14 30920741 to 30920751 10 - TSS region transcription start site region 127899
Tssr127900 14 30921739 to 30921763 24 - TSS region transcription start site region 127900
Tssr127901 14 30921977 to 30921992 15 - TSS region transcription start site region 127901
Tssr127902 14 30923547 to 30923565 18 - TSS region transcription start site region 127902
Tssr127903 14 30923754 to 30923765 11 - TSS region transcription start site region 127903
Itih1 14 30929180 to 30943289 14109 - protein coding gene inter-alpha trypsin inhibitor, heavy chain 1
Tssr127904 14 30938068 to 30938090 22 - TSS region transcription start site region 127904
Tssr127905 14 30943275 to 30943294 19 - TSS region transcription start site region 127905
Gm41121 14 30950432 to 30951287 855 - lncRNA gene predicted gene, 41121
Cpgi6278 14 30951045 to 30951947 902 CpG island CpG island 6278
Tssr127906 14 30951255 to 30951289 34 - TSS region transcription start site region 127906
Nek4 14 30951377 to 30988821 37444 + protein coding gene NIMA (never in mitosis gene a)-related expressed kinase 4
Tssr124896 14 30951406 to 30951415 9 + TSS region transcription start site region 124896
Tssr124897 14 30951431 to 30951450 19 + TSS region transcription start site region 124897
Tssr124898 14 30951452 to 30951469 17 + TSS region transcription start site region 124898
Tssr124899 14 30951487 to 30951510 23 + TSS region transcription start site region 124899
Tssr124900 14 30951531 to 30951542 11 + TSS region transcription start site region 124900
Spcs1 14 30999826 to 31001666 1840 - protein coding gene signal peptidase complex subunit 1 homolog (S. cerevisiae)
Tssr127907 14 31000963 to 31000976 13 - TSS region transcription start site region 127907
Tssr127908 14 31001010 to 31001037 27 - TSS region transcription start site region 127908
Cpgi6279 14 31001073 to 31002202 1129 CpG island CpG island 6279
Tssr127909 14 31001311 to 31001388 77 - TSS region transcription start site region 127909
Tssr124901 14 31001383 to 31001407 24 + TSS region transcription start site region 124901
Glt8d1 14 31001400 to 31011991 10591 + protein coding gene glycosyltransferase 8 domain containing 1
Tssr124902 14 31001414 to 31001464 50 + TSS region transcription start site region 124902
Tssr127910 14 31001532 to 31001587 55 - TSS region transcription start site region 127910
Tssr127911 14 31001588 to 31001620 32 - TSS region transcription start site region 127911
Tssr124903 14 31001602 to 31001628 26 + TSS region transcription start site region 124903
Tssr124904 14 31001630 to 31001713 83 + TSS region transcription start site region 124904
Tssr124905 14 31001843 to 31001920 77 + TSS region transcription start site region 124905
Tssr4364 14 31001939 to 31001950 11 + TSS region transcription start site region 4364
Gnl3 14 31012433 to 31019131 6698 - protein coding gene guanine nucleotide binding protein-like 3 (nucleolar)
Tssr127912 14 31014227 to 31014231 4 - TSS region transcription start site region 127912
Snord69 14 31014293 to 31014351 58 - snoRNA gene small nucleolar RNA, C/D box 69
Tssr127913 14 31014356 to 31014360 4 - TSS region transcription start site region 127913
Gm24916 14 31015148 to 31015226 78 - snoRNA gene predicted gene, 24916
Snord19 14 31016219 to 31016272 53 - snoRNA gene small nucleolar RNA, C/D box 19
Cpgi6280 14 31018666 to 31019655 989 CpG island CpG island 6280
Tssr127914 14 31019004 to 31019042 38 - TSS region transcription start site region 127914
Tssr127915 14 31019055 to 31019069 14 - TSS region transcription start site region 127915
Tssr124906 14 31019125 to 31019157 32 + TSS region transcription start site region 124906
Pbrm1 14 31019138 to 31121592 102454 + protein coding gene polybromo 1
Tssr124907 14 31019159 to 31019178 19 + TSS region transcription start site region 124907
Tssr124908 14 31019183 to 31019214 31 + TSS region transcription start site region 124908
Tssr127916 14 31019345 to 31019411 66 - TSS region transcription start site region 127916
Tssr124909 14 31019439 to 31019506 67 + TSS region transcription start site region 124909
Tssr124910 14 31019700 to 31019704 4 + TSS region transcription start site region 124910
Tssr124911 14 31030640 to 31030645 5 + TSS region transcription start site region 124911
Gm49094 14 31042317 to 31043120 803 - pseudogene predicted gene, 49094
Tssr124912 14 31072159 to 31072163 4 + TSS region transcription start site region 124912
Gm5459 14 31076638 to 31077435 797 - pseudogene predicted gene 5459
Smim4 14 31088127 to 31128930 40803 - protein coding gene small integral membrane protein 4
Tssr124913 14 31093500 to 31093504 4 + TSS region transcription start site region 124913