Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:22357495-24507509

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143 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lrmda 14 22019712 to 23056085 1036373 + protein coding gene leucine rich melanocyte differentiation associated
Tssr124545 14 22365134 to 22365145 11 + TSS region transcription start site region 124545
Tssr124546 14 22365209 to 22365267 58 + TSS region transcription start site region 124546
Tssr124547 14 22365331 to 22365355 24 + TSS region transcription start site region 124547
Tssr124548 14 22369319 to 22369321 2 + TSS region transcription start site region 124548
Tssr124549 14 22371702 to 22371714 12 + TSS region transcription start site region 124549
Tssr124550 14 22371845 to 22371893 48 + TSS region transcription start site region 124550
Tssr124551 14 22371947 to 22371953 6 + TSS region transcription start site region 124551
Tssr124552 14 22378167 to 22378172 5 + TSS region transcription start site region 124552
Tssr124553 14 22394249 to 22394257 8 + TSS region transcription start site region 124553
5230400M06Rik 14 22401127 to 22402927 1800 unclassified gene RIKEN cDNA 5230400M06 gene
Tssr124554 14 22405463 to 22405466 3 + TSS region transcription start site region 124554
Tssr124555 14 22428746 to 22428756 10 + TSS region transcription start site region 124555
Tssr124556 14 22433041 to 22433054 13 + TSS region transcription start site region 124556
Tssr124557 14 22438667 to 22438678 11 + TSS region transcription start site region 124557
Tssr124558 14 22438696 to 22438711 15 + TSS region transcription start site region 124558
Tssr127707 14 22452688 to 22452699 11 - TSS region transcription start site region 127707
Tssr124559 14 22455891 to 22455896 5 + TSS region transcription start site region 124559
Tssr124560 14 22466341 to 22466363 22 + TSS region transcription start site region 124560
Tssr124561 14 22468865 to 22468890 25 + TSS region transcription start site region 124561
4930405A10Rik 14 22507174 to 22542798 35624 - antisense lncRNA gene RIKEN cDNA 4930405A10 gene
Tssr127708 14 22542790 to 22542828 38 - TSS region transcription start site region 127708
Tssr127709 14 22542843 to 22542849 6 - TSS region transcription start site region 127709
Tssr124562 14 22547353 to 22547359 6 + TSS region transcription start site region 124562
Gm5670 14 22558082 to 22558453 371 - pseudogene predicted gene 5670
Tssr124563 14 22616377 to 22616395 18 + TSS region transcription start site region 124563
Tssr127710 14 22635605 to 22635610 5 - TSS region transcription start site region 127710
Tssr124564 14 22695040 to 22695051 11 + TSS region transcription start site region 124564
Tssr124565 14 22722407 to 22722417 10 + TSS region transcription start site region 124565
Gm30926 14 22728998 to 22801875 72877 - lncRNA gene predicted gene, 30926
Tssr124566 14 22742738 to 22742743 5 + TSS region transcription start site region 124566
Tssr124567 14 22772792 to 22772795 3 + TSS region transcription start site region 124567
Gm7473 14 22775018 to 22775244 226 - pseudogene predicted gene 7473
Tssr127711 14 22780532 to 22780535 3 - TSS region transcription start site region 127711
Tssr127712 14 22801228 to 22801266 38 - TSS region transcription start site region 127712
D14Mit252 14 22811865 to 22811954 89 DNA segment DNA Segment, Chr 14 Massachusetts Institute of Technology 252
Tssr124568 14 22829368 to 22829374 6 + TSS region transcription start site region 124568
Gm18145 14 22876014 to 22876535 521 + pseudogene predicted gene, 18145
Gm30783 14 22921122 to 22932356 11234 - lncRNA gene predicted gene, 30783
Gm47601 14 22927926 to 22933500 5574 + sense intronic lncRNA gene predicted gene, 47601
D14Mit230 14 22930301 to 22930451 150 DNA segment DNA Segment, Chr 14, Massachusetts Institute of Technology 230
Tssr124569 14 22937443 to 22937454 11 + TSS region transcription start site region 124569
Gm10248 14 23038194 to 23094571 56377 - antisense lncRNA gene predicted gene 10248
Tssr124570 14 23149843 to 23149873 30 + TSS region transcription start site region 124570
D14Mit119 14 23162401 to 23162541 140 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 119
Kcnma1 14 23292291 to 24004952 712661 - protein coding gene potassium large conductance calcium-activated channel, subfamily M, alpha member 1
Tssr127713 14 23298788 to 23298793 5 - TSS region transcription start site region 127713
Tssr127714 14 23308878 to 23308883 5 - TSS region transcription start site region 127714
Gm46443 14 23321144 to 23321507 363 + pseudogene predicted gene, 46443
Tssr4342 14 23384436 to 23384443 7 + TSS region transcription start site region 4342
D14Mit208 14 23421868 to 23421992 124 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 208
Tssr124571 14 23432475 to 23432485 10 + TSS region transcription start site region 124571
Tssr124572 14 23432495 to 23432509 14 + TSS region transcription start site region 124572
Tssr127715 14 23464122 to 23464134 12 - TSS region transcription start site region 127715
D14Mit221 14 23491217 to 23491327 110 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 221
5430425E15Rik 14 23519662 to 23520844 1182 + lncRNA gene RIKEN cDNA 5430425E15 gene
Tssr127716 14 23524781 to 23524784 3 - TSS region transcription start site region 127716
Tssr127717 14 23554756 to 23554769 13 - TSS region transcription start site region 127717
Tssr127718 14 23554812 to 23554823 11 - TSS region transcription start site region 127718
Gm29626 14 23560248 to 23564589 4341 + antisense lncRNA gene predicted gene 29626
Tssr127719 14 23589830 to 23589834 4 - TSS region transcription start site region 127719
Tssr127720 14 23641712 to 23641735 23 - TSS region transcription start site region 127720
Tssr127721 14 23729387 to 23729394 7 - TSS region transcription start site region 127721
Tssr127722 14 23835541 to 23835567 26 - TSS region transcription start site region 127722
Tssr127723 14 23835846 to 23835855 9 - TSS region transcription start site region 127723
Tssr127724 14 23962219 to 23962222 3 - TSS region transcription start site region 127724
Tssr127725 14 23967112 to 23967115 3 - TSS region transcription start site region 127725
Tssr127726 14 23967148 to 23967160 12 - TSS region transcription start site region 127726
D14Mit222 14 23974070 to 23974186 116 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 222
Tssr127727 14 23989382 to 23989386 4 - TSS region transcription start site region 127727
Cpgi6232 14 24003350 to 24005462 2112 CpG island CpG island 6232
Tssr127728 14 24003926 to 24003984 58 - TSS region transcription start site region 127728
Tssr127729 14 24004118 to 24004144 26 - TSS region transcription start site region 127729
Tssr127730 14 24004207 to 24004258 51 - TSS region transcription start site region 127730
Tssr127731 14 24004284 to 24004300 16 - TSS region transcription start site region 127731
Tssr127732 14 24004487 to 24004530 43 - TSS region transcription start site region 127732
Tssr127733 14 24004876 to 24004906 30 - TSS region transcription start site region 127733
Tssr127734 14 24004952 to 24004980 28 - TSS region transcription start site region 127734
4930519K11Rik 14 24004991 to 24005837 846 + bidirectional promoter lncRNA gene RIKEN cDNA 4930519K11 gene
Gm46444 14 24011055 to 24019327 8272 - lncRNA gene predicted gene, 46444
Gm31392 14 24044637 to 24067117 22480 - lincRNA gene predicted gene, 31392
Gm6158 14 24069734 to 24070637 903 + pseudogene predicted gene 6158
Tssr124573 14 24069752 to 24069754 2 + TSS region transcription start site region 124573
Gm31250 14 24073384 to 24073852 468 - lncRNA gene predicted gene, 31250
Tssr127735 14 24081947 to 24081959 12 - TSS region transcription start site region 127735
Tssr127736 14 24081961 to 24081981 20 - TSS region transcription start site region 127736
Tssr127737 14 24081985 to 24081988 3 - TSS region transcription start site region 127737
Tssr127738 14 24081998 to 24082009 11 - TSS region transcription start site region 127738
Tssr127739 14 24082016 to 24082024 8 - TSS region transcription start site region 127739
Tssr124574 14 24082077 to 24082083 6 + TSS region transcription start site region 124574
Tssr124575 14 24082105 to 24082121 16 + TSS region transcription start site region 124575
Tssr124576 14 24082132 to 24082152 20 + TSS region transcription start site region 124576
Mir7210 14 24088877 to 24088930 53 + miRNA gene microRNA 7210
Tssr124577 14 24099570 to 24099603 33 + TSS region transcription start site region 124577
Tssr124578 14 24100163 to 24100174 11 + TSS region transcription start site region 124578
Tssr124579 14 24100286 to 24100293 7 + TSS region transcription start site region 124579
Tssr124580 14 24104177 to 24104193 16 + TSS region transcription start site region 124580
Tssr124581 14 24108819 to 24108821 2 + TSS region transcription start site region 124581
Tssr124582 14 24118764 to 24118768 4 + TSS region transcription start site region 124582
Tssr124583 14 24118861 to 24118870 9 + TSS region transcription start site region 124583
Tssr124584 14 24118927 to 24118965 38 + TSS region transcription start site region 124584
Tssr124585 14 24118993 to 24119000 7 + TSS region transcription start site region 124585
Tssr124586 14 24119027 to 24119032 5 + TSS region transcription start site region 124586
1700067A10Rik 14 24119685 to 24120255 570 unclassified gene RIKEN cDNA 1700067A10 gene
Dlg5 14 24133953 to 24245920 111967 - protein coding gene discs large MAGUK scaffold protein 5
Gm49098 14 24170160 to 24170986 826 - unclassified gene predicted gene, 49098
Tssr127740 14 24176666 to 24176667 1 - TSS region transcription start site region 127740
Tssr127741 14 24176688 to 24176699 11 - TSS region transcription start site region 127741
Tssr127742 14 24176723 to 24176729 6 - TSS region transcription start site region 127742
Cpgi6233 14 24190332 to 24190494 162 CpG island CpG island 6233
Tssr124587 14 24216265 to 24216268 3 + TSS region transcription start site region 124587
Gm17105 14 24238172 to 24243391 5219 - sense intronic lncRNA gene predicted gene 17105
Cpgi6234 14 24244647 to 24246093 1446 CpG island CpG island 6234
Tssr127743 14 24245654 to 24245693 39 - TSS region transcription start site region 127743
Tssr127744 14 24245913 to 24245925 12 - TSS region transcription start site region 127744
Gm19034 14 24284926 to 24286273 1347 + pseudogene predicted gene, 19034
E330034G19Rik 14 24293214 to 24309966 16752 + protein coding gene RIKEN cDNA E330034G19 gene
Tssr124588 14 24293452 to 24293463 11 + TSS region transcription start site region 124588
Cpgi6235 14 24358342 to 24358515 173 CpG island CpG island 6235
Gm18276 14 24358359 to 24358951 592 + pseudogene predicted gene, 18276
Tssr127745 14 24369420 to 24369425 5 - TSS region transcription start site region 127745
Tssr127746 14 24369781 to 24369793 12 - TSS region transcription start site region 127746
Tssr127747 14 24369801 to 24369808 7 - TSS region transcription start site region 127747
Tssr127748 14 24369813 to 24369819 6 - TSS region transcription start site region 127748
Gm47774 14 24375653 to 24377252 1599 - lincRNA gene predicted gene, 47774
Gm41108 14 24390017 to 24391714 1697 + lncRNA gene predicted gene, 41108
Gm41109 14 24425164 to 24429822 4658 - lncRNA gene predicted gene, 41109
Tssr127749 14 24429816 to 24429830 14 - TSS region transcription start site region 127749
Gm47814 14 24438987 to 24446403 7416 - lincRNA gene predicted gene, 47814
Tssr4343 14 24446457 to 24446463 6 - TSS region transcription start site region 4343
4933428L12Rik 14 24446554 to 24447927 1373 unclassified gene RIKEN cDNA 4933428L12 gene
Polr3a 14 24448696 to 24487058 38362 - protein coding gene polymerase (RNA) III (DNA directed) polypeptide A
Cpgi6236 14 24486590 to 24487238 648 CpG island CpG island 6236
Tssr127750 14 24486966 to 24486976 10 - TSS region transcription start site region 127750
Tssr127751 14 24486994 to 24487064 70 - TSS region transcription start site region 127751
Tssr124589 14 24487055 to 24487088 33 + TSS region transcription start site region 124589
Cpgi6237 14 24490411 to 24491327 916 CpG island CpG island 6237
Rps24 14 24490633 to 24496146 5513 + protein coding gene ribosomal protein S24
Tssr124590 14 24490678 to 24490689 11 + TSS region transcription start site region 124590
Tssr124591 14 24490709 to 24490725 16 + TSS region transcription start site region 124591
Tssr124592 14 24490749 to 24490756 7 + TSS region transcription start site region 124592
Tssr127752 14 24491751 to 24491756 5 - TSS region transcription start site region 127752
Tssr124593 14 24492828 to 24492832 4 + TSS region transcription start site region 124593