Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:19418188-19868195

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80 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm21738 14 19415857 to 19418930 3073 - protein coding gene predicted gene, 21738
Tssr4305 14 19418170 to 19418205 35 + TSS region transcription start site region 4305
Tssr4306 14 19418195 to 19418224 29 - TSS region transcription start site region 4306
Tssr4307 14 19418224 to 19418245 21 + TSS region transcription start site region 4307
Tssr4308 14 19418247 to 19418277 30 - TSS region transcription start site region 4308
Tssr4309 14 19418310 to 19418321 11 - TSS region transcription start site region 4309
Tssr4310 14 19418327 to 19418368 41 + TSS region transcription start site region 4310
Tssr4311 14 19418358 to 19418396 38 - TSS region transcription start site region 4311
Tssr4312 14 19418426 to 19418476 50 + TSS region transcription start site region 4312
Tssr4313 14 19418467 to 19418535 68 - TSS region transcription start site region 4313
Tssr4314 14 19418518 to 19418547 29 + TSS region transcription start site region 4314
Tssr4315 14 19418550 to 19418571 21 + TSS region transcription start site region 4315
Tssr4316 14 19418587 to 19418598 11 - TSS region transcription start site region 4316
Tssr4317 14 19418646 to 19418674 28 + TSS region transcription start site region 4317
Tssr4318 14 19418673 to 19418698 25 - TSS region transcription start site region 4318
Tssr4319 14 19418733 to 19418755 22 - TSS region transcription start site region 4319
Tssr4320 14 19418794 to 19418819 25 + TSS region transcription start site region 4320
Tssr4321 14 19418820 to 19418847 27 - TSS region transcription start site region 4321
Tssr4322 14 19418906 to 19418946 40 + TSS region transcription start site region 4322
Tssr4323 14 19418932 to 19418981 49 - TSS region transcription start site region 4323
Tssr4324 14 19418969 to 19419011 42 + TSS region transcription start site region 4324
Tssr4325 14 19419053 to 19419062 9 + TSS region transcription start site region 4325
Tssr4326 14 19419084 to 19419100 16 - TSS region transcription start site region 4326
Tssr4327 14 19419087 to 19419103 16 + TSS region transcription start site region 4327
Tssr4328 14 19419126 to 19419185 59 + TSS region transcription start site region 4328
Tssr4329 14 19419151 to 19419183 32 - TSS region transcription start site region 4329
Tssr4330 14 19419286 to 19419317 31 + TSS region transcription start site region 4330
Tssr4331 14 19419310 to 19419349 39 - TSS region transcription start site region 4331
Tssr4332 14 19419416 to 19419435 19 - TSS region transcription start site region 4332
Tssr4333 14 19419428 to 19419454 26 + TSS region transcription start site region 4333
Tssr4334 14 19419450 to 19419494 44 - TSS region transcription start site region 4334
Tssr4335 14 19419597 to 19419646 49 - TSS region transcription start site region 4335
Tssr4336 14 19419601 to 19419640 39 + TSS region transcription start site region 4336
Tssr4337 14 19419674 to 19419692 18 - TSS region transcription start site region 4337
Gm41101 14 19484733 to 19501107 16374 + lncRNA gene predicted gene, 41101
Gm36704 14 19496370 to 19504895 8525 - lncRNA gene predicted gene, 36704
Gm48105 14 19504718 to 19529194 24476 + lincRNA gene predicted gene, 48105
Gm7352 14 19511367 to 19512558 1191 + pseudogene predicted gene 7352
Gm18577 14 19529849 to 19530908 1059 + pseudogene predicted gene, 18577
Gm2244 14 19533700 to 19549958 16258 - protein coding gene predicted gene 2244
Gm2237 14 19564906 to 19585736 20830 - protein coding gene predicted gene 2237
Gm5458 14 19594139 to 19602581 8442 - protein coding gene predicted gene 5458
Gm41102 14 19612456 to 19617947 5491 - lincRNA gene predicted gene, 41102
4930469B13Rik 14 19615130 to 19628632 13502 + lincRNA gene RIKEN cDNA 4930469B13 gene
Gm49800 14 19617521 to 19617710 189 + pseudogene predicted gene, 49800
Tssr127547 14 19626871 to 19626880 9 - TSS region transcription start site region 127547
Tssr127548 14 19626998 to 19627009 11 - TSS region transcription start site region 127548
Tssr127549 14 19627169 to 19627216 47 - TSS region transcription start site region 127549
Tssr127550 14 19627441 to 19627447 6 - TSS region transcription start site region 127550
Tssr127551 14 19642898 to 19642915 17 - TSS region transcription start site region 127551
Tssr127552 14 19643188 to 19643195 7 - TSS region transcription start site region 127552
Tssr127553 14 19646074 to 19646079 5 - TSS region transcription start site region 127553
Gm48157 14 19646670 to 19647054 384 - pseudogene predicted gene, 48157
Tssr127554 14 19653360 to 19653371 11 - TSS region transcription start site region 127554
Tssr127555 14 19653403 to 19653416 13 - TSS region transcription start site region 127555
Gm17030 14 19675339 to 19677660 2321 - pseudogene predicted gene 17030
Gm7371 14 19688439 to 19688992 553 - pseudogene predicted gene 7371
D14Mit47 14 19692543 to 19692638 95 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 47
Gm49341 14 19696830 to 19697209 379 - pseudogene predicted gene, 49341
Gm29899 14 19708003 to 19742879 34876 + lncRNA gene predicted gene, 29899
Tssr124368 14 19708017 to 19708053 36 + TSS region transcription start site region 124368
Cpgi6194 14 19750824 to 19752599 1775 CpG island CpG island 6194
Tssr124369 14 19750903 to 19750925 22 + TSS region transcription start site region 124369
Tssr124370 14 19750937 to 19750954 17 + TSS region transcription start site region 124370
Tssr124371 14 19750961 to 19750968 7 + TSS region transcription start site region 124371
Tssr127556 14 19751124 to 19751146 22 - TSS region transcription start site region 127556
Nid2 14 19751265 to 19811787 60522 + protein coding gene nidogen 2
Tssr124372 14 19751276 to 19751292 16 + TSS region transcription start site region 124372
Tssr127557 14 19755544 to 19755582 38 - TSS region transcription start site region 127557
Tssr124373 14 19763749 to 19763768 19 + TSS region transcription start site region 124373
Tssr124374 14 19779584 to 19779621 37 + TSS region transcription start site region 124374
Tssr124375 14 19811275 to 19811294 19 + TSS region transcription start site region 124375
Rtraf 14 19811402 to 19823823 12421 - protein coding gene RNA transcription, translation and transport factor
Cpgi6195 14 19823188 to 19824074 886 CpG island CpG island 6195
Tssr127558 14 19823771 to 19823797 26 - TSS region transcription start site region 127558
Tssr127559 14 19823807 to 19823832 25 - TSS region transcription start site region 127559
Tssr124376 14 19830675 to 19830685 10 + TSS region transcription start site region 124376
D14Ertd670e 14 19838925 to 19844677 5752 + lincRNA gene DNA segment, Chr 14, ERATO Doi 670, expressed
Tssr127560 14 19860598 to 19860621 23 - TSS region transcription start site region 127560
Gm48283 14 19866980 to 19873455 6475 + lincRNA gene predicted gene, 48283