Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:18023575-19444267

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163 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Prdt6 14 16430839 to 18038090 1607251 QTL prion disease incubation time 6
Thrb 14 17660261 to 18038090 377829 + protein coding gene thyroid hormone receptor beta
Tssr124357 14 18030722 to 18030726 4 + TSS region transcription start site region 124357
Tssr124358 14 18034343 to 18034347 4 + TSS region transcription start site region 124358
Gm27851 14 18060275 to 18060337 62 + snRNA gene predicted gene, 27851
Gm19290 14 18095724 to 18096034 310 + pseudogene predicted gene, 19290
Gm6773 14 18099183 to 18100060 877 - pseudogene predicted gene 6773
Gm48481 14 18189040 to 18189554 514 + pseudogene predicted gene, 48481
Gm44469 14 18200675 to 18200753 78 + miRNA gene predicted gene, 44469
Nr1d2 14 18204056 to 18239106 35050 - protein coding gene nuclear receptor subfamily 1, group D, member 2
Cpgi6187 14 18238128 to 18239573 1445 CpG island CpG island 6187
Tssr127524 14 18238952 to 18239036 84 - TSS region transcription start site region 127524
Tssr127525 14 18239053 to 18239098 45 - TSS region transcription start site region 127525
Gm7084 14 18242422 to 18243253 831 + pseudogene predicted gene 7084
Cpgi6188 14 18242788 to 18242956 168 CpG island CpG island 6188
Rpl15 14 18267823 to 18271024 3201 - protein coding gene ribosomal protein L15
Cpgi6189 14 18270064 to 18271551 1487 CpG island CpG island 6189
Tssr127526 14 18270953 to 18270991 38 - TSS region transcription start site region 127526
Tssr127527 14 18271064 to 18271075 11 - TSS region transcription start site region 127527
Tssr124359 14 18271122 to 18271178 56 + TSS region transcription start site region 124359
Nkiras1 14 18271136 to 18284003 12867 + protein coding gene NFKB inhibitor interacting Ras-like protein 1
Tssr127528 14 18271191 to 18271205 14 - TSS region transcription start site region 127528
Tssr124360 14 18271201 to 18271290 89 + TSS region transcription start site region 124360
Tssr124361 14 18271308 to 18271321 13 + TSS region transcription start site region 124361
Ube2e1 14 18282726 to 18331844 49118 - protein coding gene ubiquitin-conjugating enzyme E2E 1
Gm41098 14 18297678 to 18309834 12156 - lncRNA gene predicted gene, 41098
Cpgi6190 14 18326967 to 18327429 462 CpG island CpG island 6190
Tssr124362 14 18330038 to 18330040 2 + TSS region transcription start site region 124362
Cpgi6191 14 18330813 to 18332107 1294 CpG island CpG island 6191
Tssr127529 14 18331099 to 18331113 14 - TSS region transcription start site region 127529
Tssr4257 14 18331148 to 18331170 22 + TSS region transcription start site region 4257
Tssr127530 14 18331737 to 18331751 14 - TSS region transcription start site region 127530
Tssr127531 14 18331768 to 18331836 68 - TSS region transcription start site region 127531
Tssr127532 14 18331855 to 18331862 7 - TSS region transcription start site region 127532
Tssr127533 14 18332045 to 18332064 19 - TSS region transcription start site region 127533
Gm22350 14 18445875 to 18446030 155 + snRNA gene predicted gene, 22350
Gm32587 14 18463610 to 18555034 91424 + lncRNA gene predicted gene, 32587
Gm38620 14 18494159 to 18504615 10456 + lncRNA gene predicted gene, 38620
Tssr124363 14 18531323 to 18531354 31 + TSS region transcription start site region 124363
Gm6781 14 18531363 to 18532604 1241 + pseudogene predicted gene 6781
Gm4939 14 18543808 to 18545132 1324 - pseudogene predicted gene 4939
Tssr127534 14 18545317 to 18545330 13 - TSS region transcription start site region 127534
Tssr4258 14 18545338 to 18545368 30 - TSS region transcription start site region 4258
Ube2e2 14 18573575 to 18894267 320692 - protein coding gene ubiquitin-conjugating enzyme E2E 2
Tssr127535 14 18665140 to 18665156 16 - TSS region transcription start site region 127535
6820402I19Rik 14 18699826 to 18701946 2120 unclassified gene RIKEN cDNA 6820402I19 gene
Tssr127536 14 18703929 to 18703933 4 - TSS region transcription start site region 127536
Tssr127537 14 18709647 to 18709675 28 - TSS region transcription start site region 127537
D14Mit46 14 18780954 to 18781083 129 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 46
Gm22499 14 18814169 to 18814303 134 + snoRNA gene predicted gene, 22499
Tssr127538 14 18816900 to 18816912 12 - TSS region transcription start site region 127538
Gm15916 14 18831296 to 18832031 735 + pseudogene predicted gene 15916
Tssr127539 14 18868954 to 18868970 16 - TSS region transcription start site region 127539
Cpgi6192 14 18893060 to 18894333 1273 CpG island CpG island 6192
Tssr127540 14 18893376 to 18893420 44 - TSS region transcription start site region 127540
Tssr127541 14 18893623 to 18893647 24 - TSS region transcription start site region 127541
Tssr127542 14 18893664 to 18893717 53 - TSS region transcription start site region 127542
Tssr127543 14 18893749 to 18893816 67 - TSS region transcription start site region 127543
Tssr127544 14 18894255 to 18894282 27 - TSS region transcription start site region 127544
Tssr127545 14 18896720 to 18896725 5 - TSS region transcription start site region 127545
Gm6785 14 19014762 to 19015937 1175 - pseudogene predicted gene 6785
Gm3778 14 19016769 to 19024591 7822 + pseudogene predicted gene 3778
Gm34440 14 19035852 to 19036352 500 + pseudogene predicted gene, 34440
Cpgi6193 14 19041966 to 19042747 781 CpG island CpG island 6193
Gm41099 14 19042216 to 19087764 45548 + protein coding gene predicted gene, 41099
Gm48781 14 19043184 to 19043425 241 + pseudogene predicted gene, 48781
Gm48782 14 19059945 to 19061823 1878 - pseudogene predicted gene, 48782
Gm18275 14 19102467 to 19104133 1666 + pseudogene predicted gene, 18275
Gm7089 14 19107435 to 19108900 1465 - pseudogene predicted gene 7089
Gm48785 14 19116429 to 19116924 495 - pseudogene predicted gene, 48785
Tssr124364 14 19127756 to 19127777 21 + TSS region transcription start site region 124364
Gm8582 14 19127800 to 19132109 4309 + pseudogene predicted gene 8582
Tssr124365 14 19133106 to 19133114 8 + TSS region transcription start site region 124365
Gm8584 14 19159695 to 19164408 4713 + pseudogene predicted gene 8584
Gm48098 14 19263216 to 19263497 281 + pseudogene predicted gene, 48098
Gm48099 14 19271274 to 19282822 11548 + lincRNA gene predicted gene, 48099
Tssr124366 14 19277972 to 19277991 19 + TSS region transcription start site region 124366
Tssr124367 14 19278148 to 19278179 31 + TSS region transcription start site region 124367
Tssr127546 14 19278190 to 19278199 9 - TSS region transcription start site region 127546
Gm6122 14 19290531 to 19291209 678 - pseudogene predicted gene 6122
Gm33022 14 19292162 to 19292529 367 - lncRNA gene predicted gene, 33022
Gm5630 14 19350748 to 19351647 899 - pseudogene predicted pseudogene 5630
Gm9637 14 19401727 to 19402599 872 - pseudogene predicted gene 9637
Tssr4259 14 19415707 to 19415711 4 + TSS region transcription start site region 4259
Tssr4260 14 19415765 to 19415794 29 + TSS region transcription start site region 4260
Tssr4261 14 19415796 to 19415821 25 - TSS region transcription start site region 4261
Gm21738 14 19415857 to 19418930 3073 - protein coding gene predicted gene, 21738
Tssr4262 14 19415932 to 19415949 17 - TSS region transcription start site region 4262
Tssr4263 14 19416028 to 19416047 19 - TSS region transcription start site region 4263
Tssr4264 14 19416045 to 19416057 12 + TSS region transcription start site region 4264
Tssr4265 14 19416099 to 19416122 23 + TSS region transcription start site region 4265
Tssr4266 14 19416126 to 19416159 33 - TSS region transcription start site region 4266
Tssr4267 14 19416144 to 19416179 35 + TSS region transcription start site region 4267
Tssr4268 14 19416168 to 19416209 41 - TSS region transcription start site region 4268
Tssr4269 14 19416272 to 19416290 18 - TSS region transcription start site region 4269
Tssr4270 14 19416325 to 19416371 46 + TSS region transcription start site region 4270
Tssr4271 14 19416352 to 19416410 58 - TSS region transcription start site region 4271
Tssr4272 14 19416378 to 19416390 12 + TSS region transcription start site region 4272
Tssr4273 14 19416407 to 19416414 7 + TSS region transcription start site region 4273
Tssr4274 14 19416454 to 19416475 21 + TSS region transcription start site region 4274
Tssr4275 14 19416481 to 19416502 21 - TSS region transcription start site region 4275
Tssr4276 14 19416615 to 19416656 41 - TSS region transcription start site region 4276
Tssr4277 14 19416682 to 19416707 25 + TSS region transcription start site region 4277
Tssr4278 14 19416716 to 19416738 22 - TSS region transcription start site region 4278
Tssr4279 14 19416754 to 19416765 11 - TSS region transcription start site region 4279
Tssr4280 14 19416786 to 19416825 39 + TSS region transcription start site region 4280
Tssr4281 14 19416803 to 19416866 63 - TSS region transcription start site region 4281
Tssr4282 14 19416873 to 19416884 11 - TSS region transcription start site region 4282
Tssr4283 14 19416893 to 19416904 11 + TSS region transcription start site region 4283
Tssr4284 14 19417353 to 19417379 26 + TSS region transcription start site region 4284
Tssr4285 14 19417385 to 19417404 19 - TSS region transcription start site region 4285
Tssr4286 14 19417481 to 19417508 27 + TSS region transcription start site region 4286
Tssr4287 14 19417499 to 19417543 44 - TSS region transcription start site region 4287
Tssr4288 14 19417549 to 19417571 22 + TSS region transcription start site region 4288
Tssr4289 14 19417655 to 19417666 11 - TSS region transcription start site region 4289
Tssr4290 14 19417657 to 19417673 16 + TSS region transcription start site region 4290
Tssr4291 14 19417724 to 19417753 29 - TSS region transcription start site region 4291
Tssr4292 14 19417746 to 19417789 43 + TSS region transcription start site region 4292
Tssr4293 14 19417763 to 19417824 61 - TSS region transcription start site region 4293
Tssr4294 14 19417801 to 19417826 25 + TSS region transcription start site region 4294
Tssr4295 14 19417831 to 19417899 68 - TSS region transcription start site region 4295
Tssr4296 14 19417840 to 19417862 22 + TSS region transcription start site region 4296
Tssr4297 14 19417908 to 19417926 18 - TSS region transcription start site region 4297
Tssr4298 14 19417920 to 19417944 24 + TSS region transcription start site region 4298
Tssr4299 14 19417973 to 19417984 11 + TSS region transcription start site region 4299
Tssr4300 14 19418003 to 19418022 19 + TSS region transcription start site region 4300
Tssr4301 14 19418022 to 19418040 18 - TSS region transcription start site region 4301
Tssr4302 14 19418041 to 19418052 11 - TSS region transcription start site region 4302
Tssr4303 14 19418085 to 19418107 22 + TSS region transcription start site region 4303
Tssr4304 14 19418112 to 19418136 24 - TSS region transcription start site region 4304
Tssr4305 14 19418170 to 19418205 35 + TSS region transcription start site region 4305
Tssr4306 14 19418195 to 19418224 29 - TSS region transcription start site region 4306
Tssr4307 14 19418224 to 19418245 21 + TSS region transcription start site region 4307
Tssr4308 14 19418247 to 19418277 30 - TSS region transcription start site region 4308
Tssr4309 14 19418310 to 19418321 11 - TSS region transcription start site region 4309
Tssr4310 14 19418327 to 19418368 41 + TSS region transcription start site region 4310
Tssr4311 14 19418358 to 19418396 38 - TSS region transcription start site region 4311
Tssr4312 14 19418426 to 19418476 50 + TSS region transcription start site region 4312
Tssr4313 14 19418467 to 19418535 68 - TSS region transcription start site region 4313
Tssr4314 14 19418518 to 19418547 29 + TSS region transcription start site region 4314
Tssr4315 14 19418550 to 19418571 21 + TSS region transcription start site region 4315
Tssr4316 14 19418587 to 19418598 11 - TSS region transcription start site region 4316
Tssr4317 14 19418646 to 19418674 28 + TSS region transcription start site region 4317
Tssr4318 14 19418673 to 19418698 25 - TSS region transcription start site region 4318
Tssr4319 14 19418733 to 19418755 22 - TSS region transcription start site region 4319
Tssr4320 14 19418794 to 19418819 25 + TSS region transcription start site region 4320
Tssr4321 14 19418820 to 19418847 27 - TSS region transcription start site region 4321
Tssr4322 14 19418906 to 19418946 40 + TSS region transcription start site region 4322
Tssr4323 14 19418932 to 19418981 49 - TSS region transcription start site region 4323
Tssr4324 14 19418969 to 19419011 42 + TSS region transcription start site region 4324
Tssr4325 14 19419053 to 19419062 9 + TSS region transcription start site region 4325
Tssr4326 14 19419084 to 19419100 16 - TSS region transcription start site region 4326
Tssr4327 14 19419087 to 19419103 16 + TSS region transcription start site region 4327
Tssr4328 14 19419126 to 19419185 59 + TSS region transcription start site region 4328
Tssr4329 14 19419151 to 19419183 32 - TSS region transcription start site region 4329
Tssr4330 14 19419286 to 19419317 31 + TSS region transcription start site region 4330
Tssr4331 14 19419310 to 19419349 39 - TSS region transcription start site region 4331
Tssr4332 14 19419416 to 19419435 19 - TSS region transcription start site region 4332
Tssr4333 14 19419428 to 19419454 26 + TSS region transcription start site region 4333
Tssr4334 14 19419450 to 19419494 44 - TSS region transcription start site region 4334
Tssr4335 14 19419597 to 19419646 49 - TSS region transcription start site region 4335
Tssr4336 14 19419601 to 19419640 39 + TSS region transcription start site region 4336
Tssr4337 14 19419674 to 19419692 18 - TSS region transcription start site region 4337