Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:17767920-21067944

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448 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
sky 14 12481829 to 21012571 8530742 heritable phenotypic marker severe kyphosis
Prdt6 14 16430839 to 18038090 1607251 QTL prion disease incubation time 6
Thrb 14 17660261 to 18038090 377829 + protein coding gene thyroid hormone receptor beta
Gm48320 14 17770649 to 17771122 473 - pseudogene predicted gene, 48320
Tssr124349 14 17784648 to 17784674 26 + TSS region transcription start site region 124349
Tssr4256 14 17847410 to 17847430 20 + TSS region transcription start site region 4256
Gm24140 14 17884808 to 17885133 325 - unclassified non-coding RNA gene predicted gene, 24140
Gm48321 14 17931138 to 18021909 90771 - antisense lncRNA gene predicted gene, 48321
Tssr124350 14 17945212 to 17945220 8 + TSS region transcription start site region 124350
Tssr124351 14 17962801 to 17962821 20 + TSS region transcription start site region 124351
Tssr124352 14 17981506 to 17981509 3 + TSS region transcription start site region 124352
Tssr124353 14 17981633 to 17981639 6 + TSS region transcription start site region 124353
Tssr124354 14 17981813 to 17981820 7 + TSS region transcription start site region 124354
Tssr124355 14 17981867 to 17981876 9 + TSS region transcription start site region 124355
Tssr124356 14 17981888 to 17981900 12 + TSS region transcription start site region 124356
Tssr127523 14 18021888 to 18021914 26 - TSS region transcription start site region 127523
Tssr124357 14 18030722 to 18030726 4 + TSS region transcription start site region 124357
Tssr124358 14 18034343 to 18034347 4 + TSS region transcription start site region 124358
Gm27851 14 18060275 to 18060337 62 + snRNA gene predicted gene, 27851
Gm19290 14 18095724 to 18096034 310 + pseudogene predicted gene, 19290
Gm6773 14 18099183 to 18100060 877 - pseudogene predicted gene 6773
Gm48481 14 18189040 to 18189554 514 + pseudogene predicted gene, 48481
Gm44469 14 18200675 to 18200753 78 + miRNA gene predicted gene, 44469
Nr1d2 14 18204056 to 18239106 35050 - protein coding gene nuclear receptor subfamily 1, group D, member 2
Cpgi6187 14 18238128 to 18239573 1445 CpG island CpG island 6187
Tssr127524 14 18238952 to 18239036 84 - TSS region transcription start site region 127524
Tssr127525 14 18239053 to 18239098 45 - TSS region transcription start site region 127525
Gm7084 14 18242422 to 18243253 831 + pseudogene predicted gene 7084
Cpgi6188 14 18242788 to 18242956 168 CpG island CpG island 6188
Rpl15 14 18267823 to 18271024 3201 - protein coding gene ribosomal protein L15
Cpgi6189 14 18270064 to 18271551 1487 CpG island CpG island 6189
Tssr127526 14 18270953 to 18270991 38 - TSS region transcription start site region 127526
Tssr127527 14 18271064 to 18271075 11 - TSS region transcription start site region 127527
Tssr124359 14 18271122 to 18271178 56 + TSS region transcription start site region 124359
Nkiras1 14 18271136 to 18284003 12867 + protein coding gene NFKB inhibitor interacting Ras-like protein 1
Tssr127528 14 18271191 to 18271205 14 - TSS region transcription start site region 127528
Tssr124360 14 18271201 to 18271290 89 + TSS region transcription start site region 124360
Tssr124361 14 18271308 to 18271321 13 + TSS region transcription start site region 124361
Ube2e1 14 18282726 to 18331844 49118 - protein coding gene ubiquitin-conjugating enzyme E2E 1
Gm41098 14 18297678 to 18309834 12156 - lncRNA gene predicted gene, 41098
Cpgi6190 14 18326967 to 18327429 462 CpG island CpG island 6190
Tssr124362 14 18330038 to 18330040 2 + TSS region transcription start site region 124362
Cpgi6191 14 18330813 to 18332107 1294 CpG island CpG island 6191
Tssr127529 14 18331099 to 18331113 14 - TSS region transcription start site region 127529
Tssr4257 14 18331148 to 18331170 22 + TSS region transcription start site region 4257
Tssr127530 14 18331737 to 18331751 14 - TSS region transcription start site region 127530
Tssr127531 14 18331768 to 18331836 68 - TSS region transcription start site region 127531
Tssr127532 14 18331855 to 18331862 7 - TSS region transcription start site region 127532
Tssr127533 14 18332045 to 18332064 19 - TSS region transcription start site region 127533
Gm22350 14 18445875 to 18446030 155 + snRNA gene predicted gene, 22350
Gm32587 14 18463610 to 18555034 91424 + lncRNA gene predicted gene, 32587
Gm38620 14 18494159 to 18504615 10456 + lncRNA gene predicted gene, 38620
Tssr124363 14 18531323 to 18531354 31 + TSS region transcription start site region 124363
Gm6781 14 18531363 to 18532604 1241 + pseudogene predicted gene 6781
Gm4939 14 18543808 to 18545132 1324 - pseudogene predicted gene 4939
Tssr127534 14 18545317 to 18545330 13 - TSS region transcription start site region 127534
Tssr4258 14 18545338 to 18545368 30 - TSS region transcription start site region 4258
Ube2e2 14 18573575 to 18894267 320692 - protein coding gene ubiquitin-conjugating enzyme E2E 2
Tssr127535 14 18665140 to 18665156 16 - TSS region transcription start site region 127535
6820402I19Rik 14 18699826 to 18701946 2120 unclassified gene RIKEN cDNA 6820402I19 gene
Tssr127536 14 18703929 to 18703933 4 - TSS region transcription start site region 127536
Tssr127537 14 18709647 to 18709675 28 - TSS region transcription start site region 127537
D14Mit46 14 18780954 to 18781083 129 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 46
Gm22499 14 18814169 to 18814303 134 + snoRNA gene predicted gene, 22499
Tssr127538 14 18816900 to 18816912 12 - TSS region transcription start site region 127538
Gm15916 14 18831296 to 18832031 735 + pseudogene predicted gene 15916
Tssr127539 14 18868954 to 18868970 16 - TSS region transcription start site region 127539
Cpgi6192 14 18893060 to 18894333 1273 CpG island CpG island 6192
Tssr127540 14 18893376 to 18893420 44 - TSS region transcription start site region 127540
Tssr127541 14 18893623 to 18893647 24 - TSS region transcription start site region 127541
Tssr127542 14 18893664 to 18893717 53 - TSS region transcription start site region 127542
Tssr127543 14 18893749 to 18893816 67 - TSS region transcription start site region 127543
Tssr127544 14 18894255 to 18894282 27 - TSS region transcription start site region 127544
Tssr127545 14 18896720 to 18896725 5 - TSS region transcription start site region 127545
Gm6785 14 19014762 to 19015937 1175 - pseudogene predicted gene 6785
Gm3778 14 19016769 to 19024591 7822 + pseudogene predicted gene 3778
Gm34440 14 19035852 to 19036352 500 + pseudogene predicted gene, 34440
Cpgi6193 14 19041966 to 19042747 781 CpG island CpG island 6193
Gm41099 14 19042216 to 19087764 45548 + protein coding gene predicted gene, 41099
Gm48781 14 19043184 to 19043425 241 + pseudogene predicted gene, 48781
Gm48782 14 19059945 to 19061823 1878 - pseudogene predicted gene, 48782
Gm18275 14 19102467 to 19104133 1666 + pseudogene predicted gene, 18275
Gm7089 14 19107435 to 19108900 1465 - pseudogene predicted gene 7089
Gm48785 14 19116429 to 19116924 495 - pseudogene predicted gene, 48785
Tssr124364 14 19127756 to 19127777 21 + TSS region transcription start site region 124364
Gm8582 14 19127800 to 19132109 4309 + pseudogene predicted gene 8582
Tssr124365 14 19133106 to 19133114 8 + TSS region transcription start site region 124365
Gm8584 14 19159695 to 19164408 4713 + pseudogene predicted gene 8584
Gm48098 14 19263216 to 19263497 281 + pseudogene predicted gene, 48098
Gm48099 14 19271274 to 19282822 11548 + lincRNA gene predicted gene, 48099
Tssr124366 14 19277972 to 19277991 19 + TSS region transcription start site region 124366
Tssr124367 14 19278148 to 19278179 31 + TSS region transcription start site region 124367
Tssr127546 14 19278190 to 19278199 9 - TSS region transcription start site region 127546
Gm6122 14 19290531 to 19291209 678 - pseudogene predicted gene 6122
Gm33022 14 19292162 to 19292529 367 - lncRNA gene predicted gene, 33022
Gm5630 14 19350748 to 19351647 899 - pseudogene predicted pseudogene 5630
Gm9637 14 19401727 to 19402599 872 - pseudogene predicted gene 9637
Tssr4259 14 19415707 to 19415711 4 + TSS region transcription start site region 4259
Tssr4260 14 19415765 to 19415794 29 + TSS region transcription start site region 4260
Tssr4261 14 19415796 to 19415821 25 - TSS region transcription start site region 4261
Gm21738 14 19415857 to 19418930 3073 - protein coding gene predicted gene, 21738
Tssr4262 14 19415932 to 19415949 17 - TSS region transcription start site region 4262
Tssr4263 14 19416028 to 19416047 19 - TSS region transcription start site region 4263
Tssr4264 14 19416045 to 19416057 12 + TSS region transcription start site region 4264
Tssr4265 14 19416099 to 19416122 23 + TSS region transcription start site region 4265
Tssr4266 14 19416126 to 19416159 33 - TSS region transcription start site region 4266
Tssr4267 14 19416144 to 19416179 35 + TSS region transcription start site region 4267
Tssr4268 14 19416168 to 19416209 41 - TSS region transcription start site region 4268
Tssr4269 14 19416272 to 19416290 18 - TSS region transcription start site region 4269
Tssr4270 14 19416325 to 19416371 46 + TSS region transcription start site region 4270
Tssr4271 14 19416352 to 19416410 58 - TSS region transcription start site region 4271
Tssr4272 14 19416378 to 19416390 12 + TSS region transcription start site region 4272
Tssr4273 14 19416407 to 19416414 7 + TSS region transcription start site region 4273
Tssr4274 14 19416454 to 19416475 21 + TSS region transcription start site region 4274
Tssr4275 14 19416481 to 19416502 21 - TSS region transcription start site region 4275
Tssr4276 14 19416615 to 19416656 41 - TSS region transcription start site region 4276
Tssr4277 14 19416682 to 19416707 25 + TSS region transcription start site region 4277
Tssr4278 14 19416716 to 19416738 22 - TSS region transcription start site region 4278
Tssr4279 14 19416754 to 19416765 11 - TSS region transcription start site region 4279
Tssr4280 14 19416786 to 19416825 39 + TSS region transcription start site region 4280
Tssr4281 14 19416803 to 19416866 63 - TSS region transcription start site region 4281
Tssr4282 14 19416873 to 19416884 11 - TSS region transcription start site region 4282
Tssr4283 14 19416893 to 19416904 11 + TSS region transcription start site region 4283
Tssr4284 14 19417353 to 19417379 26 + TSS region transcription start site region 4284
Tssr4285 14 19417385 to 19417404 19 - TSS region transcription start site region 4285
Tssr4286 14 19417481 to 19417508 27 + TSS region transcription start site region 4286
Tssr4287 14 19417499 to 19417543 44 - TSS region transcription start site region 4287
Tssr4288 14 19417549 to 19417571 22 + TSS region transcription start site region 4288
Tssr4289 14 19417655 to 19417666 11 - TSS region transcription start site region 4289
Tssr4290 14 19417657 to 19417673 16 + TSS region transcription start site region 4290
Tssr4291 14 19417724 to 19417753 29 - TSS region transcription start site region 4291
Tssr4292 14 19417746 to 19417789 43 + TSS region transcription start site region 4292
Tssr4293 14 19417763 to 19417824 61 - TSS region transcription start site region 4293
Tssr4294 14 19417801 to 19417826 25 + TSS region transcription start site region 4294
Tssr4295 14 19417831 to 19417899 68 - TSS region transcription start site region 4295
Tssr4296 14 19417840 to 19417862 22 + TSS region transcription start site region 4296
Tssr4297 14 19417908 to 19417926 18 - TSS region transcription start site region 4297
Tssr4298 14 19417920 to 19417944 24 + TSS region transcription start site region 4298
Tssr4299 14 19417973 to 19417984 11 + TSS region transcription start site region 4299
Tssr4300 14 19418003 to 19418022 19 + TSS region transcription start site region 4300
Tssr4301 14 19418022 to 19418040 18 - TSS region transcription start site region 4301
Tssr4302 14 19418041 to 19418052 11 - TSS region transcription start site region 4302
Tssr4303 14 19418085 to 19418107 22 + TSS region transcription start site region 4303
Tssr4304 14 19418112 to 19418136 24 - TSS region transcription start site region 4304
Tssr4305 14 19418170 to 19418205 35 + TSS region transcription start site region 4305
Tssr4306 14 19418195 to 19418224 29 - TSS region transcription start site region 4306
Tssr4307 14 19418224 to 19418245 21 + TSS region transcription start site region 4307
Tssr4308 14 19418247 to 19418277 30 - TSS region transcription start site region 4308
Tssr4309 14 19418310 to 19418321 11 - TSS region transcription start site region 4309
Tssr4310 14 19418327 to 19418368 41 + TSS region transcription start site region 4310
Tssr4311 14 19418358 to 19418396 38 - TSS region transcription start site region 4311
Tssr4312 14 19418426 to 19418476 50 + TSS region transcription start site region 4312
Tssr4313 14 19418467 to 19418535 68 - TSS region transcription start site region 4313
Tssr4314 14 19418518 to 19418547 29 + TSS region transcription start site region 4314
Tssr4315 14 19418550 to 19418571 21 + TSS region transcription start site region 4315
Tssr4316 14 19418587 to 19418598 11 - TSS region transcription start site region 4316
Tssr4317 14 19418646 to 19418674 28 + TSS region transcription start site region 4317
Tssr4318 14 19418673 to 19418698 25 - TSS region transcription start site region 4318
Tssr4319 14 19418733 to 19418755 22 - TSS region transcription start site region 4319
Tssr4320 14 19418794 to 19418819 25 + TSS region transcription start site region 4320
Tssr4321 14 19418820 to 19418847 27 - TSS region transcription start site region 4321
Tssr4322 14 19418906 to 19418946 40 + TSS region transcription start site region 4322
Tssr4323 14 19418932 to 19418981 49 - TSS region transcription start site region 4323
Tssr4324 14 19418969 to 19419011 42 + TSS region transcription start site region 4324
Tssr4325 14 19419053 to 19419062 9 + TSS region transcription start site region 4325
Tssr4326 14 19419084 to 19419100 16 - TSS region transcription start site region 4326
Tssr4327 14 19419087 to 19419103 16 + TSS region transcription start site region 4327
Tssr4328 14 19419126 to 19419185 59 + TSS region transcription start site region 4328
Tssr4329 14 19419151 to 19419183 32 - TSS region transcription start site region 4329
Tssr4330 14 19419286 to 19419317 31 + TSS region transcription start site region 4330
Tssr4331 14 19419310 to 19419349 39 - TSS region transcription start site region 4331
Tssr4332 14 19419416 to 19419435 19 - TSS region transcription start site region 4332
Tssr4333 14 19419428 to 19419454 26 + TSS region transcription start site region 4333
Tssr4334 14 19419450 to 19419494 44 - TSS region transcription start site region 4334
Tssr4335 14 19419597 to 19419646 49 - TSS region transcription start site region 4335
Tssr4336 14 19419601 to 19419640 39 + TSS region transcription start site region 4336
Tssr4337 14 19419674 to 19419692 18 - TSS region transcription start site region 4337
Gm41101 14 19484733 to 19501107 16374 + lncRNA gene predicted gene, 41101
Gm36704 14 19496370 to 19504895 8525 - lncRNA gene predicted gene, 36704
Gm48105 14 19504718 to 19529194 24476 + lincRNA gene predicted gene, 48105
Gm7352 14 19511367 to 19512558 1191 + pseudogene predicted gene 7352
Gm18577 14 19529849 to 19530908 1059 + pseudogene predicted gene, 18577
Gm2244 14 19533700 to 19549958 16258 - protein coding gene predicted gene 2244
Gm2237 14 19564906 to 19585736 20830 - protein coding gene predicted gene 2237
Gm5458 14 19594139 to 19602581 8442 - protein coding gene predicted gene 5458
Gm41102 14 19612456 to 19617947 5491 - lincRNA gene predicted gene, 41102
4930469B13Rik 14 19615130 to 19628632 13502 + lincRNA gene RIKEN cDNA 4930469B13 gene
Gm49800 14 19617521 to 19617710 189 + pseudogene predicted gene, 49800
Tssr127547 14 19626871 to 19626880 9 - TSS region transcription start site region 127547
Tssr127548 14 19626998 to 19627009 11 - TSS region transcription start site region 127548
Tssr127549 14 19627169 to 19627216 47 - TSS region transcription start site region 127549
Tssr127550 14 19627441 to 19627447 6 - TSS region transcription start site region 127550
Tssr127551 14 19642898 to 19642915 17 - TSS region transcription start site region 127551
Tssr127552 14 19643188 to 19643195 7 - TSS region transcription start site region 127552
Tssr127553 14 19646074 to 19646079 5 - TSS region transcription start site region 127553
Gm48157 14 19646670 to 19647054 384 - pseudogene predicted gene, 48157
Tssr127554 14 19653360 to 19653371 11 - TSS region transcription start site region 127554
Tssr127555 14 19653403 to 19653416 13 - TSS region transcription start site region 127555
Gm17030 14 19675339 to 19677660 2321 - pseudogene predicted gene 17030
Gm7371 14 19688439 to 19688992 553 - pseudogene predicted gene 7371