Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:99427399-99957529

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98 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Map1b 13 99421446 to 99516540 95094 - protein coding gene microtubule-associated protein 1B
Tssr4149 13 99429592 to 99429635 43 + TSS region transcription start site region 4149
Tssr123696 13 99429891 to 99429901 10 - TSS region transcription start site region 123696
Tssr123697 13 99430081 to 99430092 11 - TSS region transcription start site region 123697
Tssr123698 13 99430212 to 99430242 30 - TSS region transcription start site region 123698
Tssr123699 13 99430303 to 99430326 23 - TSS region transcription start site region 123699
Tssr123700 13 99430328 to 99430373 45 - TSS region transcription start site region 123700
Tssr123701 13 99430386 to 99430398 12 - TSS region transcription start site region 123701
Tssr123702 13 99430406 to 99430417 11 - TSS region transcription start site region 123702
Tssr123703 13 99430458 to 99430469 11 - TSS region transcription start site region 123703
Tssr123704 13 99430509 to 99430525 16 - TSS region transcription start site region 123704
Tssr123705 13 99430817 to 99430826 9 - TSS region transcription start site region 123705
Tssr123706 13 99431035 to 99431053 18 - TSS region transcription start site region 123706
Tssr123707 13 99431224 to 99431245 21 - TSS region transcription start site region 123707
Tssr123708 13 99431432 to 99431443 11 - TSS region transcription start site region 123708
Tssr123709 13 99431601 to 99431615 14 - TSS region transcription start site region 123709
Tssr123710 13 99432808 to 99432823 15 - TSS region transcription start site region 123710
Tssr123711 13 99433014 to 99433027 13 - TSS region transcription start site region 123711
Cpgi6022 13 99433235 to 99433536 301 CpG island CpG island 6022
Tssr123712 13 99433244 to 99433253 9 - TSS region transcription start site region 123712
Tssr123713 13 99433459 to 99433468 9 - TSS region transcription start site region 123713
Tssr123714 13 99433499 to 99433520 21 - TSS region transcription start site region 123714
Tssr123715 13 99433532 to 99433539 7 - TSS region transcription start site region 123715
Tssr123716 13 99433596 to 99433607 11 - TSS region transcription start site region 123716
Tssr123717 13 99434001 to 99434006 5 - TSS region transcription start site region 123717
Tssr123718 13 99434095 to 99434125 30 - TSS region transcription start site region 123718
Tssr120833 13 99434148 to 99434183 35 + TSS region transcription start site region 120833
Tssr123719 13 99434195 to 99434204 9 - TSS region transcription start site region 123719
Tssr4150 13 99434212 to 99434264 52 + TSS region transcription start site region 4150
Tssr123720 13 99434216 to 99434235 19 - TSS region transcription start site region 123720
Tssr123721 13 99434250 to 99434274 24 - TSS region transcription start site region 123721
Tssr123722 13 99434281 to 99434294 13 - TSS region transcription start site region 123722
Tssr123723 13 99434301 to 99434313 12 - TSS region transcription start site region 123723
Tssr123724 13 99434317 to 99434334 17 - TSS region transcription start site region 123724
Tssr123725 13 99434338 to 99434400 62 - TSS region transcription start site region 123725
Tssr123726 13 99434410 to 99434433 23 - TSS region transcription start site region 123726
Tssr123727 13 99434441 to 99434456 15 - TSS region transcription start site region 123727
Tssr123728 13 99434464 to 99434475 11 - TSS region transcription start site region 123728
Tssr123729 13 99434480 to 99434542 62 - TSS region transcription start site region 123729
Tssr123730 13 99434547 to 99434556 9 - TSS region transcription start site region 123730
Tssr123731 13 99434561 to 99434570 9 - TSS region transcription start site region 123731
Tssr123732 13 99434571 to 99434603 32 - TSS region transcription start site region 123732
Tssr123733 13 99434608 to 99434618 10 - TSS region transcription start site region 123733
Tssr123734 13 99434636 to 99434648 12 - TSS region transcription start site region 123734
Tssr123735 13 99434654 to 99434663 9 - TSS region transcription start site region 123735
Tssr4151 13 99434722 to 99434725 3 - TSS region transcription start site region 4151
Tssr123736 13 99434831 to 99434842 11 - TSS region transcription start site region 123736
Tssr123737 13 99434892 to 99434902 10 - TSS region transcription start site region 123737
Tssr123738 13 99434955 to 99434969 14 - TSS region transcription start site region 123738
Tssr123739 13 99435009 to 99435016 7 - TSS region transcription start site region 123739
Tssr120834 13 99435065 to 99435084 19 + TSS region transcription start site region 120834
Tssr123740 13 99435136 to 99435154 18 - TSS region transcription start site region 123740
Tssr123741 13 99435263 to 99435273 10 - TSS region transcription start site region 123741
Tssr123742 13 99435394 to 99435412 18 - TSS region transcription start site region 123742
Tssr123743 13 99435448 to 99435459 11 - TSS region transcription start site region 123743
Tssr123744 13 99435531 to 99435542 11 - TSS region transcription start site region 123744
D13Gor4 13 99440887 to 99441323 436 DNA segment DNA segment, Chr 13, Gorin 4
Tssr123745 13 99441684 to 99441778 94 - TSS region transcription start site region 123745
Tssr123746 13 99444365 to 99444370 5 - TSS region transcription start site region 123746
Tssr123747 13 99444422 to 99444441 19 - TSS region transcription start site region 123747
Tssr123748 13 99444443 to 99444488 45 - TSS region transcription start site region 123748
Tssr123749 13 99444527 to 99444552 25 - TSS region transcription start site region 123749
Tssr123750 13 99444555 to 99444562 7 - TSS region transcription start site region 123750
Tssr123751 13 99447346 to 99447393 47 - TSS region transcription start site region 123751
Tssr123752 13 99447523 to 99447530 7 - TSS region transcription start site region 123752
Tssr123753 13 99447585 to 99447622 37 - TSS region transcription start site region 123753
Tssr123754 13 99447625 to 99447644 19 - TSS region transcription start site region 123754
Tssr123755 13 99470327 to 99470376 49 - TSS region transcription start site region 123755
5330431K02Rik 13 99502477 to 99504439 1962 - unclassified gene RIKEN cDNA 5330431K02 gene
Tssr123756 13 99513615 to 99513619 4 - TSS region transcription start site region 123756
Cpgi6023 13 99514875 to 99515541 666 CpG island CpG island 6023
Cpgi6024 13 99515860 to 99516914 1054 CpG island CpG island 6024
Tssr123757 13 99516512 to 99516523 11 - TSS region transcription start site region 123757
Tssr123758 13 99516537 to 99516579 42 - TSS region transcription start site region 123758
Gm26559 13 99516629 to 99521760 5131 + bidirectional promoter lncRNA gene predicted gene, 26559
Tssr123759 13 99516666 to 99516677 11 - TSS region transcription start site region 123759
Tssr120835 13 99550940 to 99550945 5 + TSS region transcription start site region 120835
Gm47158 13 99561442 to 99561919 477 + pseudogene predicted gene, 47158
Tssr123760 13 99585664 to 99585667 3 - TSS region transcription start site region 123760
D13Mit36 13 99603460 to 99603598 138 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 36
Ses10 13 99603460 to 99603598 138 QTL salmonella enteritidis susceptibility 10
Cpgi6025 13 99630363 to 99630771 408 CpG island CpG island 6025
Tssr120836 13 99641951 to 99641957 6 + TSS region transcription start site region 120836
1700012J22Rik 13 99641974 to 99642803 829 + unclassified gene RIKEN cDNA 1700012J22 gene
Tssr120837 13 99641983 to 99641992 9 + TSS region transcription start site region 120837
Gm24471 13 99692399 to 99692529 130 - snoRNA gene predicted gene, 24471
Cpgi6026 13 99692983 to 99693248 265 CpG island CpG island 6026
D13Die4 13 99791448 to 99791679 231 DNA segment DNA segment, Chr 13, Dietrich 4
Tssr123761 13 99853254 to 99853258 4 - TSS region transcription start site region 123761
Cartpt 13 99898483 to 99900683 2200 - protein coding gene CART prepropeptide
Cpgi6027 13 99899934 to 99901021 1087 CpG island CpG island 6027
Tssr123762 13 99900645 to 99900669 24 - TSS region transcription start site region 123762
Tssr123763 13 99900786 to 99900789 3 - TSS region transcription start site region 123763
Gm41039 13 99933395 to 99948322 14927 - lncRNA gene predicted gene, 41039
D13Die21 13 99936248 to 99936368 120 DNA segment DNA segment, Chr 13, Dietrich 21
Tssr120838 13 99939579 to 99939613 34 + TSS region transcription start site region 120838
Mccc2 13 100015639 to 99948532 -67107 - protein coding gene methylcrotonoyl-Coenzyme A carboxylase 2 (beta)
Sod1m 13 110563377 to 99603460 -10959917 QTL superoxide dismutase 1, soluble, modifier