Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:99334786-99425562

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ptcd2 13 99319649 to 99344678 25029 - protein coding gene pentatricopeptide repeat domain 2
Cpgi6020 13 99344303 to 99345021 718 CpG island CpG island 6020
Tssr123676 13 99344620 to 99344631 11 - TSS region transcription start site region 123676
Tssr123677 13 99344652 to 99344706 54 - TSS region transcription start site region 123677
Tssr120829 13 99344775 to 99344806 31 + TSS region transcription start site region 120829
Mrps27 13 99344786 to 99415562 70776 + protein coding gene mitochondrial ribosomal protein S27
Cpgi6021 13 99353079 to 99353574 495 CpG island CpG island 6021
Gm41038 13 99354717 to 99362958 8241 + lncRNA gene predicted gene, 41038
Tssr120830 13 99369758 to 99369764 6 + TSS region transcription start site region 120830
Gm41037 13 99396390 to 99409815 13425 - lncRNA gene predicted gene, 41037
6430562O15Rik 13 99410836 to 99412826 1990 - lncRNA gene RIKEN cDNA 6430562O15 gene
Tssr123678 13 99411920 to 99411934 14 - TSS region transcription start site region 123678
Tssr123679 13 99412816 to 99412839 23 - TSS region transcription start site region 123679
Tssr120831 13 99415153 to 99415157 4 + TSS region transcription start site region 120831
Map1b 13 99421446 to 99516540 95094 - protein coding gene microtubule-associated protein 1B
Tssr123680 13 99421723 to 99421740 17 - TSS region transcription start site region 123680
Tssr123681 13 99422197 to 99422209 12 - TSS region transcription start site region 123681
Tssr123682 13 99422654 to 99422673 19 - TSS region transcription start site region 123682
Tssr123683 13 99422692 to 99422704 12 - TSS region transcription start site region 123683
Tssr123684 13 99422855 to 99422867 12 - TSS region transcription start site region 123684
Tssr123685 13 99422875 to 99422887 12 - TSS region transcription start site region 123685
Tssr123686 13 99422890 to 99422904 14 - TSS region transcription start site region 123686
Tssr123687 13 99422912 to 99422927 15 - TSS region transcription start site region 123687
Tssr123688 13 99423570 to 99423593 23 - TSS region transcription start site region 123688
Tssr123689 13 99424412 to 99424416 4 - TSS region transcription start site region 123689
Tssr123690 13 99425131 to 99425146 15 - TSS region transcription start site region 123690
Tssr123691 13 99425220 to 99425236 16 - TSS region transcription start site region 123691
Tssr120832 13 99425371 to 99425402 31 + TSS region transcription start site region 120832
Tssr123692 13 99425418 to 99425440 22 - TSS region transcription start site region 123692