Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:98183076-98354754

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Arhgef28 13 97899469 to 98206439 306970 - protein coding gene Rho guanine nucleotide exchange factor (GEF) 28
Cpgi5998 13 98205673 to 98206776 1103 CpG island CpG island 5998
Tssr123620 13 98206137 to 98206148 11 - TSS region transcription start site region 123620
Tssr123621 13 98206151 to 98206186 35 - TSS region transcription start site region 123621
Utp15 13 98246845 to 98262992 16147 - protein coding gene UTP15 small subunit processome component
Cpgi5999 13 98262676 to 98263720 1044 CpG island CpG island 5999
Tssr123622 13 98262946 to 98263020 74 - TSS region transcription start site region 123622
Tssr123623 13 98263026 to 98263047 21 - TSS region transcription start site region 123623
Ankra2 13 98263076 to 98274754 11678 + protein coding gene ankyrin repeat, family A (RFXANK-like), 2
Tssr120794 13 98263105 to 98263177 72 + TSS region transcription start site region 120794
Tssr120795 13 98263187 to 98263221 34 + TSS region transcription start site region 120795
Tssr120796 13 98263262 to 98263302 40 + TSS region transcription start site region 120796
Tssr120797 13 98263326 to 98263337 11 + TSS region transcription start site region 120797
Gm21976 13 98279887 to 98307154 27267 + protein coding gene predicted gene 21976
Btf3 13 98309897 to 98317006 7109 - protein coding gene basic transcription factor 3
Cpgi6000 13 98316331 to 98317313 982 CpG island CpG island 6000
Tssr120798 13 98316362 to 98316368 6 + TSS region transcription start site region 120798
Tssr120799 13 98316384 to 98316406 22 + TSS region transcription start site region 120799
Tssr120800 13 98316415 to 98316421 6 + TSS region transcription start site region 120800
Tssr120801 13 98316433 to 98316441 8 + TSS region transcription start site region 120801
Tssr123624 13 98316745 to 98316784 39 - TSS region transcription start site region 123624
Tssr123625 13 98316864 to 98316890 26 - TSS region transcription start site region 123625
Tssr123626 13 98316975 to 98317003 28 - TSS region transcription start site region 123626
Tssr120802 13 98317069 to 98317089 20 + TSS region transcription start site region 120802
Gm9828 13 98317116 to 98324415 7299 + bidirectional promoter lncRNA gene predicted gene 9828
Cpgi6001 13 98353989 to 98356291 2302 CpG island CpG island 6001
Tssr120803 13 98354234 to 98354250 16 + TSS region transcription start site region 120803
Foxd1 13 98354245 to 98356705 2460 + protein coding gene forkhead box D1
Tssr120804 13 98354281 to 98354288 7 + TSS region transcription start site region 120804
Tssr120805 13 98354388 to 98354399 11 + TSS region transcription start site region 120805
Tssr120806 13 98354440 to 98354451 11 + TSS region transcription start site region 120806