MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 13:96513074-96573083

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Polk	13	96480690 to 96542579	61889	-	protein coding gene	polymerase (DNA directed), kappa
D13Mit111	13	96536912 to 96537061	149		DNA segment	DNA segment, Chr 13, Massachusetts Institute of Technology 111
Cpgi5983	13	96542216 to 96543670	1454		CpG island	CpG island 5983
Tssr123562	13	96542322 to 96542333	11	-	TSS region	transcription start site region 123562
Tssr123563	13	96542334 to 96542345	11	-	TSS region	transcription start site region 123563
Tssr123564	13	96542434 to 96542445	11	-	TSS region	transcription start site region 123564
Tssr123565	13	96542479 to 96542523	44	-	TSS region	transcription start site region 123565
Tssr120735	13	96542517 to 96542522	5	+	TSS region	transcription start site region 120735
Tssr120736	13	96542541 to 96542562	21	+	TSS region	transcription start site region 120736
Tssr123566	13	96542554 to 96542567	13	-	TSS region	transcription start site region 123566
Tssr120737	13	96542602 to 96542626	24	+	TSS region	transcription start site region 120737
Tssr120738	13	96542727 to 96542775	48	+	TSS region	transcription start site region 120738
Col4a3bp	13	96542735 to 96640167	97432	+	protein coding gene	collagen, type IV, alpha 3 (Goodpasture antigen) binding protein
Gm48133	13	96542993 to 96543652	659	-	antisense lncRNA gene	predicted gene, 48133
Tssr120739	13	96543074 to 96543083	9	+	TSS region	transcription start site region 120739
Gm48138	13	96556232 to 96559111	2879	+	unclassified gene	predicted gene, 48138
Tssr120740	13	96565404 to 96565410	6	+	TSS region	transcription start site region 120740