Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:96173345-96603380

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm25213 13 96357111 to 96357223 112 + miRNA gene predicted gene, 25213
Gm8712 13 96376930 to 96377630 700 + pseudogene predicted gene 8712
Cpgi5982 13 96388216 to 96388717 501 CpG island CpG island 5982
Poc5 13 96388294 to 96417211 28917 + protein coding gene POC5 centriolar protein
Tssr120732 13 96388305 to 96388338 33 + TSS region transcription start site region 120732
Tssr120733 13 96388345 to 96388380 35 + TSS region transcription start site region 120733
Tssr120734 13 96388387 to 96388401 14 + TSS region transcription start site region 120734
Ankdd1b 13 96416134 to 96471198 55064 - protein coding gene ankyrin repeat and death domain containing 1B
D13Gor3 13 96424526 to 96424827 301 DNA segment DNA segment, Chr 13, Gorin 3
Tssr123559 13 96435956 to 96435967 11 - TSS region transcription start site region 123559
Tssr4145 13 96470769 to 96470774 5 + TSS region transcription start site region 4145
Tssr123560 13 96471179 to 96471190 11 - TSS region transcription start site region 123560
Tssr123561 13 96471214 to 96471224 10 - TSS region transcription start site region 123561
Polk 13 96480690 to 96542579 61889 - protein coding gene polymerase (DNA directed), kappa
Gm17622 13 96490733 to 96491120 387 + protein coding gene predicted gene, 17622
D13Mit111 13 96536912 to 96537061 149 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 111
Cpgi5983 13 96542216 to 96543670 1454 CpG island CpG island 5983
Tssr123562 13 96542322 to 96542333 11 - TSS region transcription start site region 123562
Tssr123563 13 96542334 to 96542345 11 - TSS region transcription start site region 123563
Tssr123564 13 96542434 to 96542445 11 - TSS region transcription start site region 123564
Tssr123565 13 96542479 to 96542523 44 - TSS region transcription start site region 123565
Tssr120735 13 96542517 to 96542522 5 + TSS region transcription start site region 120735
Tssr120736 13 96542541 to 96542562 21 + TSS region transcription start site region 120736
Tssr123566 13 96542554 to 96542567 13 - TSS region transcription start site region 123566
Tssr120737 13 96542602 to 96542626 24 + TSS region transcription start site region 120737
Tssr120738 13 96542727 to 96542775 48 + TSS region transcription start site region 120738
Col4a3bp 13 96542735 to 96640167 97432 + protein coding gene collagen, type IV, alpha 3 (Goodpasture antigen) binding protein
Gm48133 13 96542993 to 96543652 659 - antisense lncRNA gene predicted gene, 48133
Tssr120739 13 96543074 to 96543083 9 + TSS region transcription start site region 120739
Gm48138 13 96556232 to 96559111 2879 + unclassified gene predicted gene, 48138
Tssr120740 13 96565404 to 96565410 6 + TSS region transcription start site region 120740
Gm46436 13 96576630 to 96577923 1293 + lncRNA gene predicted gene, 46436
Tssr120741 13 96603063 to 96603074 11 + TSS region transcription start site region 120741