Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:85883307-88213310

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm46396 13 85891742 to 85892125 383 + pseudogene predicted gene, 46396
D13Mit314 13 85929019 to 85929131 112 DNA segment DNA Segment, Chr 13 Massachusetts Institute of Technology 314
Gm34526 13 86017038 to 86038907 21869 - lncRNA gene predicted gene, 34526
Cox7c 13 86044798 to 86046795 1997 - protein coding gene cytochrome c oxidase subunit 7C
Gm22574 13 86044989 to 86045048 59 - snoRNA gene predicted gene, 22574
D13Ertd332e 13 86045007 to 86045211 204 DNA segment DNA segment, Chr 13, ERATO Doi 332, expressed
Cpgi5918 13 86046262 to 86046944 682 CpG island CpG island 5918
Tssr123369 13 86046772 to 86046800 28 - TSS region transcription start site region 123369
Tssr123370 13 86046901 to 86046904 3 - TSS region transcription start site region 123370
Tssr123371 13 86050352 to 86050396 44 - TSS region transcription start site region 123371
Tssr123372 13 86054214 to 86054227 13 - TSS region transcription start site region 123372
Tssr120556 13 86160129 to 86160130 1 + TSS region transcription start site region 120556
Gm27025 13 86235827 to 86237727 1900 + pseudogene predicted gene, 27025
Gm25700 13 86725823 to 86725932 109 - miRNA gene predicted gene, 25700
Tssr4135 13 87048307 to 87048310 3 + TSS region transcription start site region 4135
Gm47642 13 87234439 to 87234594 155 - pseudogene predicted gene, 47642
Gm18265 13 87307726 to 87308524 798 + pseudogene predicted gene, 18265
Gm24935 13 87456778 to 87456887 109 + miRNA gene predicted gene, 24935
Tssr120557 13 87663475 to 87663478 3 + TSS region transcription start site region 120557
Tssr120558 13 87667350 to 87667355 5 + TSS region transcription start site region 120558
D13Mit27 13 87753866 to 87754064 198 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 27
Gm21232 13 87782971 to 87783976 1005 + pseudogene predicted gene, 21232
Gm41012 13 87793851 to 87799957 6106 - lncRNA gene predicted gene, 41012
Gm19239 13 87826538 to 87827059 521 + pseudogene predicted gene, 19239
Gm47649 13 87977497 to 87980299 2802 - unclassified gene predicted gene, 47649
Tssr123373 13 88125751 to 88125752 1 - TSS region transcription start site region 123373
D13Mit315 13 88184190 to 88184312 122 DNA segment DNA Segment, Chr 13 Massachusetts Institute of Technology 315
Gm27044 13 88184661 to 88185456 795 - pseudogene predicted gene, 27044
Egaq4 13 112294569 to 87753866 -24540703 QTL early growth adjusted QTL 4