Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:85195827-87277727

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ccnh 13 85189377 to 85213723 24346 + protein coding gene cyclin H
Tssr120554 13 85196246 to 85196292 46 + TSS region transcription start site region 120554
Tssr120555 13 85197244 to 85197252 8 + TSS region transcription start site region 120555
Rasa1 13 85214780 to 85289130 74350 - protein coding gene RAS p21 protein activator 1
Tssr123353 13 85216076 to 85216089 13 - TSS region transcription start site region 123353
Tssr123354 13 85245118 to 85245124 6 - TSS region transcription start site region 123354
Tssr123355 13 85258357 to 85258376 19 - TSS region transcription start site region 123355
Tssr123356 13 85282895 to 85282901 6 - TSS region transcription start site region 123356
Tssr123357 13 85284075 to 85284102 27 - TSS region transcription start site region 123357
Tssr123358 13 85284628 to 85284636 8 - TSS region transcription start site region 123358
Tssr123359 13 85285459 to 85285464 5 - TSS region transcription start site region 123359
Tssr123360 13 85285759 to 85285776 17 - TSS region transcription start site region 123360
Tssr123361 13 85288031 to 85288042 11 - TSS region transcription start site region 123361
Cpgi5917 13 85288288 to 85289843 1555 CpG island CpG island 5917
Tssr123362 13 85288999 to 85289058 59 - TSS region transcription start site region 123362
Tssr123363 13 85289082 to 85289136 54 - TSS region transcription start site region 123363
Tssr123364 13 85289155 to 85289165 10 - TSS region transcription start site region 123364
Tssr123365 13 85289190 to 85289236 46 - TSS region transcription start site region 123365
Tssr123366 13 85289324 to 85289406 82 - TSS region transcription start site region 123366
Tssr123367 13 85289461 to 85289491 30 - TSS region transcription start site region 123367
D13Mit126 13 85333752 to 85333890 138 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 126
Gm37641 13 85411681 to 85411919 238 - unclassified gene predicted gene, 37641
Gm47635 13 85516402 to 85516619 217 + pseudogene predicted gene, 47635
Tssr123368 13 85538314 to 85538316 2 - TSS region transcription start site region 123368
Gm5666 13 85572976 to 85573578 602 - pseudogene predicted gene 5666
Gm47636 13 85865112 to 85865333 221 - pseudogene predicted gene, 47636
Gm46396 13 85891742 to 85892125 383 + pseudogene predicted gene, 46396
D13Mit314 13 85929019 to 85929131 112 DNA segment DNA Segment, Chr 13 Massachusetts Institute of Technology 314
Gm34526 13 86017038 to 86038907 21869 - lncRNA gene predicted gene, 34526
Cox7c 13 86044798 to 86046795 1997 - protein coding gene cytochrome c oxidase subunit 7C
Gm22574 13 86044989 to 86045048 59 - snoRNA gene predicted gene, 22574
D13Ertd332e 13 86045007 to 86045211 204 DNA segment DNA segment, Chr 13, ERATO Doi 332, expressed
Cpgi5918 13 86046262 to 86046944 682 CpG island CpG island 5918
Tssr123369 13 86046772 to 86046800 28 - TSS region transcription start site region 123369
Tssr123370 13 86046901 to 86046904 3 - TSS region transcription start site region 123370
Tssr123371 13 86050352 to 86050396 44 - TSS region transcription start site region 123371
Tssr123372 13 86054214 to 86054227 13 - TSS region transcription start site region 123372
Tssr120556 13 86160129 to 86160130 1 + TSS region transcription start site region 120556
Gm27025 13 86235827 to 86237727 1900 + pseudogene predicted gene, 27025
Gm25700 13 86725823 to 86725932 109 - miRNA gene predicted gene, 25700
Tssr4135 13 87048307 to 87048310 3 + TSS region transcription start site region 4135
Gm47642 13 87234439 to 87234594 155 - pseudogene predicted gene, 47642