Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:84202177-85174677

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
A230107N01Rik 13 84219581 to 84222175 2594 - antisense lncRNA gene RIKEN cDNA A230107N01 gene
Cpgi5911 13 84222009 to 84222809 800 CpG island CpG island 5911
Tssr120540 13 84222186 to 84222199 13 + TSS region transcription start site region 120540
Tmem161b 13 84222187 to 84295966 73779 + protein coding gene transmembrane protein 161B
Tssr120541 13 84222286 to 84222356 70 + TSS region transcription start site region 120541
Tssr120542 13 84244110 to 84244114 4 + TSS region transcription start site region 120542
Gm49223 13 84274844 to 84280817 5973 + sense intronic lncRNA gene predicted gene, 49223
Tssr120543 13 84280755 to 84280758 3 + TSS region transcription start site region 120543
Gm46432 13 84281179 to 84281816 637 - pseudogene predicted gene, 46432
Tssr120544 13 84285227 to 84285232 5 + TSS region transcription start site region 120544
Tssr120545 13 84290290 to 84290300 10 + TSS region transcription start site region 120545
Gm26927 13 84339149 to 84340113 964 - pseudogene predicted gene, 26927
Tssr123347 13 84340184 to 84340188 4 - TSS region transcription start site region 123347
Cpgi5912 13 84345802 to 84346379 577 CpG island CpG island 5912
Gm41011 13 84347671 to 84357771 10100 + lncRNA gene predicted gene, 41011
Cpgi5913 13 84347826 to 84348116 290 CpG island CpG island 5913
Tssr123348 13 84347884 to 84347906 22 - TSS region transcription start site region 123348
Tssr120546 13 84348425 to 84348455 30 + TSS region transcription start site region 120546
Cpgi5914 13 84404721 to 84404884 163 CpG island CpG island 5914
D13Mit285 13 84553251 to 84553374 123 DNA segment DNA Segment, Chr 13, Massachusetts Institute of Technology 285
Gm34196 13 84573766 to 84906167 332401 - lncRNA gene predicted gene, 34196
Gm34246 13 84677177 to 84699677 22500 + lncRNA gene predicted gene, 34246
Gm26913 13 84690210 to 84690941 731 - pseudogene predicted gene, 26913
Heal8 13 84905880 to 84906000 120 QTL wound healing/regeneration 8
D13Mit191 13 84905880 to 84906000 120 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 191
Gm4059 13 84973712 to 84974317 605 - pseudogene predicted gene 4059
Gm4066 13 85025098 to 85025436 338 - pseudogene predicted pseudogene 4066
Gm47745 13 85094335 to 85095373 1038 + pseudogene predicted gene, 47745
Gm4076 13 85126550 to 85127514 964 - protein coding gene predicted gene 4076
Tssr120547 13 85126564 to 85126590 26 + TSS region transcription start site region 120547
Tssr123349 13 85126630 to 85126639 9 - TSS region transcription start site region 123349
Tssr120548 13 85126690 to 85126702 12 + TSS region transcription start site region 120548
Cpgi5915 13 85126699 to 85127516 817 CpG island CpG island 5915
Tssr120549 13 85126735 to 85126769 34 + TSS region transcription start site region 120549
Tssr4134 13 85126848 to 85126882 34 + TSS region transcription start site region 4134
Tssr123350 13 85126986 to 85127010 24 - TSS region transcription start site region 123350
Tssr123351 13 85127087 to 85127104 17 - TSS region transcription start site region 123351
Tssr123352 13 85127393 to 85127414 21 - TSS region transcription start site region 123352
Gm47746 13 85140720 to 85141102 382 + pseudogene predicted gene, 47746