Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:64162114-64364374

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47 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi5775 13 64161487 to 64163108 1621 CpG island CpG island 5775
Habp4 13 64161866 to 64186537 24671 + protein coding gene hyaluronic acid binding protein 4
Cpgi5776 13 64169795 to 64170165 370 CpG island CpG island 5776
Tssr120201 13 64183861 to 64183870 9 + TSS region transcription start site region 120201
Tssr120202 13 64183886 to 64183899 13 + TSS region transcription start site region 120202
Cdc14b 13 64192545 to 64274988 82443 - protein coding gene CDC14 cell division cycle 14B
Tssr120203 13 64204002 to 64204011 9 + TSS region transcription start site region 120203
Gm46424 13 64210523 to 64210690 167 + pseudogene predicted gene, 46424
Cpgi5777 13 64248394 to 64249115 721 CpG island CpG island 5777
Tssr123023 13 64248495 to 64248538 43 - TSS region transcription start site region 123023
Tssr123024 13 64248623 to 64248648 25 - TSS region transcription start site region 123024
Tssr120204 13 64248649 to 64248675 26 + TSS region transcription start site region 120204
1810034E14Rik 13 64248700 to 64268145 19445 + antisense lncRNA gene RIKEN cDNA 1810034E14 gene
D13Ertd666e 13 64258899 to 64259103 204 DNA segment DNA segment, Chr 13, ERATO Doi 666, expressed
Gm47004 13 64262114 to 64264374 2260 + unclassified gene predicted gene, 47004
Tssr123025 13 64272619 to 64272623 4 - TSS region transcription start site region 123025
Cpgi5778 13 64273928 to 64275701 1773 CpG island CpG island 5778
Tssr123026 13 64274922 to 64274947 25 - TSS region transcription start site region 123026
Tssr123027 13 64274950 to 64274959 9 - TSS region transcription start site region 123027
Tssr123028 13 64274962 to 64275004 42 - TSS region transcription start site region 123028
Tssr123029 13 64275031 to 64275042 11 - TSS region transcription start site region 123029
Tssr120205 13 64275120 to 64275131 11 + TSS region transcription start site region 120205
Tssr120206 13 64276258 to 64276262 4 + TSS region transcription start site region 120206
Tssr123030 13 64289156 to 64289158 2 - TSS region transcription start site region 123030
Gm47003 13 64291077 to 64298039 6962 + antisense lncRNA gene predicted gene, 47003
Prxl2c 13 64291836 to 64312710 20874 - protein coding gene peroxiredoxin like 2C
Gm25654 13 64296437 to 64296524 87 - snRNA gene predicted gene, 25654
D13Dcr11 13 64299118 to 64299213 95 DNA segment DNA Segment, Chr 13, Derry C. Roopenian 11
Tssr123031 13 64307064 to 64307068 4 - TSS region transcription start site region 123031
Cpgi5779 13 64312120 to 64312964 844 CpG island CpG island 5779
Tssr123032 13 64312568 to 64312623 55 - TSS region transcription start site region 123032
Tssr123033 13 64312628 to 64312654 26 - TSS region transcription start site region 123033
Tssr123034 13 64312676 to 64312746 70 - TSS region transcription start site region 123034
Gm31128 13 64316550 to 64343787 27237 - lncRNA gene predicted gene, 31128
Tssr123035 13 64320386 to 64320391 5 - TSS region transcription start site region 123035
Gm47123 13 64361052 to 64363022 1970 + antisense lncRNA gene predicted gene, 47123
Gm49230 13 64361343 to 64361737 394 - pseudogene predicted gene, 49230
Ctsl 13 64361890 to 64370748 8858 - protein coding gene cathepsin L
Tssr123036 13 64363000 to 64363003 3 - TSS region transcription start site region 123036
Tssr123037 13 64363688 to 64363699 11 - TSS region transcription start site region 123037
Tssr123038 13 64363748 to 64363759 11 - TSS region transcription start site region 123038
Tssr120207 13 64363795 to 64363805 10 + TSS region transcription start site region 120207
Tssr123039 13 64363851 to 64363862 11 - TSS region transcription start site region 123039
Tssr123040 13 64363936 to 64364054 118 - TSS region transcription start site region 123040
Tssr123041 13 64364056 to 64364138 82 - TSS region transcription start site region 123041
Tssr123042 13 64364141 to 64364195 54 - TSS region transcription start site region 123042
Tssr120208 13 64364163 to 64364175 12 + TSS region transcription start site region 120208