Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:63645240-64070302

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D13Mit311 13 63648993 to 63649113 120 DNA segment DNA Segment, Chr 13 Massachusetts Institute of Technology 311
Gm47387 13 63661797 to 63662161 364 + pseudogene predicted gene, 47387
1700024I08Rik 13 63675756 to 63734298 58542 - lincRNA gene RIKEN cDNA 1700024I08 gene
Tssr122990 13 63701930 to 63701966 36 - TSS region transcription start site region 122990
Gm47390 13 63730149 to 63734599 4450 + lincRNA gene predicted gene, 47390
Gm47417 13 63748751 to 63749268 517 + pseudogene predicted gene, 47417
Gm47418 13 63794106 to 63795428 1322 + lincRNA gene predicted gene, 47418
C030010C08Rik 13 63813310 to 63815559 2249 unclassified gene RIKEN cDNA C030010C08 gene
Cpgi5769 13 63814761 to 63815755 994 CpG island CpG island 5769
Tssr122991 13 63815115 to 63815165 50 - TSS region transcription start site region 122991
Ercc6l2 13 63815240 to 63900302 85062 + protein coding gene excision repair cross-complementing rodent repair deficiency, complementation group 6 like 2
Tssr120195 13 63815290 to 63815379 89 + TSS region transcription start site region 120195
Gm47424 13 63861082 to 63862291 1209 + sense intronic lncRNA gene predicted gene, 47424
Gm46423 13 63900364 to 63908682 8318 - lncRNA gene predicted gene, 46423
Cpgi5770 13 63901219 to 63902178 959 CpG island CpG island 5770
Gm30950 13 63927755 to 63938637 10882 + lncRNA gene predicted gene, 30950
D13Ertd297e 13 63943147 to 63943360 213 DNA segment DNA segment, Chr 13, ERATO Doi 297, expressed
Gm7695 13 63945881 to 63946521 640 - pseudogene predicted gene 7695
Cpgi5771 13 63946332 to 63946545 213 CpG island CpG island 5771
Tssr4105 13 63946542 to 63946552 10 - TSS region transcription start site region 4105
Tssr122992 13 63968696 to 63968736 40 - TSS region transcription start site region 122992
D13Mit253 13 63999903 to 63999979 76 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 253
Gm30999 13 64056253 to 64057242 989 + lncRNA gene predicted gene, 30999
Hsd17b3 13 64058266 to 64089230 30964 - protein coding gene hydroxysteroid (17-beta) dehydrogenase 3
Tssr122993 13 64059811 to 64059815 4 - TSS region transcription start site region 122993
Tssr4106 13 64066065 to 64066081 16 - TSS region transcription start site region 4106
Tssr4107 13 64066084 to 64066091 7 - TSS region transcription start site region 4107
Tssr122994 13 64066113 to 64066118 5 - TSS region transcription start site region 122994
Tssr122995 13 64066127 to 64066138 11 - TSS region transcription start site region 122995
Tssr122996 13 64066141 to 64066146 5 - TSS region transcription start site region 122996
Tssr122997 13 64066178 to 64066201 23 - TSS region transcription start site region 122997
Tssr122998 13 64066284 to 64066287 3 - TSS region transcription start site region 122998