Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:59754287-59904294

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Isca1 13 59755415 to 59769789 14374 - protein coding gene iron-sulfur cluster assembly 1
Gm49354 13 59758935 to 59782245 23310 - protein coding gene predicted gene, 49354
Cpgi5743 13 59769069 to 59770568 1499 CpG island CpG island 5743
Tssr122883 13 59769529 to 59769539 10 - TSS region transcription start site region 122883
Tssr122884 13 59769751 to 59769826 75 - TSS region transcription start site region 122884
Tssr120105 13 59769928 to 59769996 68 + TSS region transcription start site region 120105
Etohd2 13 59769966 to 59773680 3714 + antisense lncRNA gene ethanol decreased 2
Tssr122885 13 59770289 to 59770304 15 - TSS region transcription start site region 122885
Tssr4095 13 59770525 to 59770531 6 + TSS region transcription start site region 4095
Tut7 13 59771876 to 59823169 51293 - protein coding gene terminal uridylyl transferase 7
Gm48194 13 59781062 to 59781578 516 - sense intronic lncRNA gene predicted gene, 48194
Tssr122886 13 59796815 to 59796821 6 - TSS region transcription start site region 122886
Cpgi5744 13 59822454 to 59823543 1089 CpG island CpG island 5744
Tssr122887 13 59822569 to 59822580 11 - TSS region transcription start site region 122887
Tssr122888 13 59822604 to 59822642 38 - TSS region transcription start site region 122888
Tssr122889 13 59822649 to 59822678 29 - TSS region transcription start site region 122889
Tssr122890 13 59822812 to 59822833 21 - TSS region transcription start site region 122890
Tssr122891 13 59822958 to 59822970 12 - TSS region transcription start site region 122891
Tssr122892 13 59822993 to 59823005 12 - TSS region transcription start site region 122892
Tssr122893 13 59823048 to 59823057 9 - TSS region transcription start site region 122893
Tssr122894 13 59823072 to 59823143 71 - TSS region transcription start site region 122894
Tssr120106 13 59823286 to 59823328 42 + TSS region transcription start site region 120106
Gm34961 13 59823586 to 59833239 9653 + lincRNA gene predicted gene, 34961
Tssr120107 13 59829287 to 59829294 7 + TSS region transcription start site region 120107
Cpgi5745 13 59839146 to 59839427 281 CpG island CpG island 5745
D13Mit122 13 59850190 to 59850337 147 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 122
Gm48384 13 59873642 to 59874964 1322 + lincRNA gene predicted gene, 48384
Tssr120108 13 59876045 to 59876056 11 + TSS region transcription start site region 120108
Gm19866 13 59901233 to 59915822 14589 - lincRNA gene predicted gene, 19866