Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:59656687-59761214

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sysbp2 13 20293442 to 59673791 39380349 QTL systolic blood pressure 2
Golm1 13 59634996 to 59675784 40788 - protein coding gene golgi membrane protein 1
Tssr120101 13 59657242 to 59657260 18 + TSS region transcription start site region 120101
Tssr122876 13 59672009 to 59672013 4 - TSS region transcription start site region 122876
D13Mit186 13 59673645 to 59673791 146 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 186
Cpgi5740 13 59674898 to 59676048 1150 CpG island CpG island 5740
Tssr122877 13 59675754 to 59675814 60 - TSS region transcription start site region 122877
4921517D22Rik 13 59687402 to 59694103 6701 - protein coding gene RIKEN cDNA 4921517D22 gene
Gm47269 13 59688371 to 59688791 420 + pseudogene predicted gene, 47269
D13Mit252 13 59691359 to 59691443 84 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 252
Tssr122878 13 59694100 to 59694108 8 - TSS region transcription start site region 122878
Spata31d1a 13 59700083 to 59706588 6505 - protein coding gene spermatogenesis associated 31 subfamily D, member 1A
Gm40972 13 59706687 to 59711214 4527 - lncRNA gene predicted gene, 40972
Cpgi5741 13 59710354 to 59710665 311 CpG island CpG island 5741
Tssr4094 13 59712282 to 59712285 3 + TSS region transcription start site region 4094
Spata31d1b 13 59712284 to 59719289 7005 + protein coding gene spermatogenesis associated 31 subfamily D, member 1B
Spata31d1d 13 59725925 to 59731752 5827 - protein coding gene spermatogenesis associated 31 subfamily D, member 1D
Cpgi5742 13 59726317 to 59726761 444 CpG island CpG island 5742
Tssr120102 13 59726698 to 59726729 31 + TSS region transcription start site region 120102
Tssr122879 13 59731734 to 59731758 24 - TSS region transcription start site region 122879
Tssr122880 13 59731768 to 59731773 5 - TSS region transcription start site region 122880
Tssr120103 13 59731885 to 59731911 26 + TSS region transcription start site region 120103
4930528D03Rik 13 59733650 to 59737470 3820 + lincRNA gene RIKEN cDNA 4930528D03 gene
Tssr120104 13 59733657 to 59733666 9 + TSS region transcription start site region 120104
1700014D04Rik 13 59740842 to 59746752 5910 - protein coding gene RIKEN cDNA 1700014D04 gene
Gm46419 13 59742743 to 59751235 8492 + lincRNA gene predicted gene, 46419
Tssr122881 13 59746929 to 59746940 11 - TSS region transcription start site region 122881
Tssr122882 13 59746944 to 59746974 30 - TSS region transcription start site region 122882
Isca1 13 59755415 to 59769789 14374 - protein coding gene iron-sulfur cluster assembly 1
Gm49354 13 59758935 to 59782245 23310 - protein coding gene predicted gene, 49354