Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:56663814-56843854

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm40961 13 56663677 to 56665463 1786 - lncRNA gene predicted gene, 40961
Gm32965 13 56671045 to 56678624 7579 - lncRNA gene predicted gene, 32965
Gm32910 13 56678032 to 56679772 1740 + lncRNA gene predicted gene, 32910
Cpgi5705 13 56682382 to 56682835 453 CpG island CpG island 5705
Gm33019 13 56682604 to 56690296 7692 + lncRNA gene predicted gene, 33019
Gm27698 13 56699930 to 56700178 248 + unclassified non-coding RNA gene predicted gene, 27698
Tssr120045 13 56702426 to 56702435 9 + TSS region transcription start site region 120045
Cpgi5706 13 56702491 to 56704005 1514 CpG island CpG island 5706
Tssr120046 13 56702983 to 56703112 129 + TSS region transcription start site region 120046
Smad5 13 56703010 to 56742377 39367 + protein coding gene SMAD family member 5
Tssr120047 13 56703360 to 56703431 71 + TSS region transcription start site region 120047
Tssr120048 13 56703437 to 56703445 8 + TSS region transcription start site region 120048
Tssr120049 13 56703449 to 56703460 11 + TSS region transcription start site region 120049
Tssr120050 13 56703504 to 56703537 33 + TSS region transcription start site region 120050
Gm27301 13 56703641 to 56703767 126 + unclassified non-coding RNA gene predicted gene, 27301
Gm27834 13 56703881 to 56704005 124 + unclassified non-coding RNA gene predicted gene, 27834
Tssr122792 13 56703943 to 56703954 11 - TSS region transcription start site region 122792
Gm27271 13 56704030 to 56704199 169 + unclassified non-coding RNA gene predicted gene, 27271
Tssr120051 13 56706554 to 56706559 5 + TSS region transcription start site region 120051
Tssr120052 13 56728905 to 56728909 4 + TSS region transcription start site region 120052
D13Mit208 13 56732406 to 56732550 144 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 208
Tssr120053 13 56747784 to 56747801 17 + TSS region transcription start site region 120053
Tssr120054 13 56747967 to 56747979 12 + TSS region transcription start site region 120054
Gm45623 13 56752371 to 56753827 1456 - protein coding gene predicted gene 45623
Cpgi5707 13 56752399 to 56754152 1753 CpG island CpG island 5707
Tssr122793 13 56753814 to 56753854 40 - TSS region transcription start site region 122793
Trpc7 13 56773113 to 56895993 122880 - protein coding gene transient receptor potential cation channel, subfamily C, member 7
Cpgi5708 13 56806846 to 56807177 331 CpG island CpG island 5708
Cpgi5709 13 56810284 to 56810589 305 CpG island CpG island 5709
Tssr120055 13 56810420 to 56810459 39 + TSS region transcription start site region 120055
D13Mit185 13 56829432 to 56829580 148 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 185