Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:55226294-55417603

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61 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nsd1 13 55209782 to 55318325 108543 + protein coding gene nuclear receptor-binding SET-domain protein 1
Tssr119930 13 55242924 to 55242927 3 + TSS region transcription start site region 119930
Tssr119931 13 55247905 to 55247953 48 + TSS region transcription start site region 119931
Tssr119932 13 55253119 to 55253121 2 + TSS region transcription start site region 119932
Gm47816 13 55253225 to 55254401 1176 - pseudogene predicted gene, 47816
Tssr119933 13 55265198 to 55265205 7 + TSS region transcription start site region 119933
D13Ertd376e 13 55270911 to 55271120 209 DNA segment DNA segment, Chr 13, ERATO Doi 376, expressed
Tssr119934 13 55272944 to 55272948 4 + TSS region transcription start site region 119934
Tssr119935 13 55290256 to 55290285 29 + TSS region transcription start site region 119935
Tssr119936 13 55315529 to 55315541 12 + TSS region transcription start site region 119936
Tssr119937 13 55316865 to 55316869 4 + TSS region transcription start site region 119937
Rab24 13 55319743 to 55321946 2203 - protein coding gene RAB24, member RAS oncogene family
Cpgi5664 13 55321294 to 55322603 1309 CpG island CpG island 5664
Tssr122682 13 55321897 to 55321911 14 - TSS region transcription start site region 122682
Tssr122683 13 55321928 to 55321974 46 - TSS region transcription start site region 122683
Tssr119938 13 55321991 to 55322053 62 + TSS region transcription start site region 119938
Prelid1 13 55322055 to 55325272 3217 + protein coding gene PRELI domain containing 1
Tssr4076 13 55322084 to 55322092 8 + TSS region transcription start site region 4076
Tssr4077 13 55322138 to 55322150 12 + TSS region transcription start site region 4077
Tssr4078 13 55322163 to 55322175 12 + TSS region transcription start site region 4078
Tssr119939 13 55322744 to 55322764 20 + TSS region transcription start site region 119939
Tssr119940 13 55322883 to 55322898 15 + TSS region transcription start site region 119940
Mxd3 13 55325168 to 55329823 4655 - protein coding gene Max dimerization protein 3
Cpgi5665 13 55329246 to 55330658 1412 CpG island CpG island 5665
Tssr122684 13 55329723 to 55329776 53 - TSS region transcription start site region 122684
Tssr119941 13 55335943 to 55335993 50 + TSS region transcription start site region 119941
Lman2 13 55343833 to 55362783 18950 - protein coding gene lectin, mannose-binding 2
Tssr122685 13 55349939 to 55349943 4 - TSS region transcription start site region 122685
Cpgi5666 13 55361955 to 55363097 1142 CpG island CpG island 5666
Tssr122686 13 55362587 to 55362630 43 - TSS region transcription start site region 122686
Tssr122687 13 55362782 to 55362804 22 - TSS region transcription start site region 122687
Tssr122688 13 55362810 to 55362821 11 - TSS region transcription start site region 122688
Tssr122689 13 55362822 to 55362833 11 - TSS region transcription start site region 122689
Rgs14 13 55369732 to 55384687 14955 + protein coding gene regulator of G-protein signaling 14
Tssr119942 13 55369736 to 55369766 30 + TSS region transcription start site region 119942
Tssr119943 13 55369767 to 55369775 8 + TSS region transcription start site region 119943
Tssr119944 13 55369781 to 55369813 32 + TSS region transcription start site region 119944
Tssr122690 13 55375789 to 55375793 4 - TSS region transcription start site region 122690
Cpgi5667 13 55379162 to 55379723 561 CpG island CpG island 5667
Tssr119945 13 55379169 to 55379179 10 + TSS region transcription start site region 119945
Slc34a1 13 55399622 to 55414695 15073 + protein coding gene solute carrier family 34 (sodium phosphate), member 1
Tssr119946 13 55399685 to 55399700 15 + TSS region transcription start site region 119946
Tssr122691 13 55400798 to 55400832 34 - TSS region transcription start site region 122691
Tssr119947 13 55401097 to 55401102 5 + TSS region transcription start site region 119947
Tssr119948 13 55401182 to 55401201 19 + TSS region transcription start site region 119948
Tssr122692 13 55401187 to 55401197 10 - TSS region transcription start site region 122692
Tssr119949 13 55402913 to 55402923 10 + TSS region transcription start site region 119949
Tssr4079 13 55402936 to 55402946 10 + TSS region transcription start site region 4079
Tssr119950 13 55403036 to 55403057 21 + TSS region transcription start site region 119950
Tssr119951 13 55405081 to 55405086 5 + TSS region transcription start site region 119951
Tssr119952 13 55409028 to 55409045 17 + TSS region transcription start site region 119952
Tssr119953 13 55412038 to 55412050 12 + TSS region transcription start site region 119953
Tssr119954 13 55412270 to 55412279 9 + TSS region transcription start site region 119954
Tssr119955 13 55413184 to 55413191 7 + TSS region transcription start site region 119955
Tssr122693 13 55413474 to 55413480 6 - TSS region transcription start site region 122693
Tssr119956 13 55413568 to 55413575 7 + TSS region transcription start site region 119956
Tssr119957 13 55413582 to 55413592 10 + TSS region transcription start site region 119957
Pfn3 13 55414688 to 55415232 544 - protein coding gene profilin 3
Cpgi5668 13 55414723 to 55415341 618 CpG island CpG island 5668
BC038268 13 55414900 to 55415591 691 protein coding gene cDNA sequence BC038268
Tssr122694 13 55415216 to 55415251 35 - TSS region transcription start site region 122694