MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 13:55201888-55221921

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi5663	13	55209719 to 55213014	3295		CpG island	CpG island 5663
Tssr119917	13	55209776 to 55209788	12	+	TSS region	transcription start site region 119917
Nsd1	13	55209782 to 55318325	108543	+	protein coding gene	nuclear receptor-binding SET-domain protein 1
Tssr119918	13	55209805 to 55209812	7	+	TSS region	transcription start site region 119918
Tssr119919	13	55210315 to 55210357	42	+	TSS region	transcription start site region 119919
Tssr119920	13	55210400 to 55210470	70	+	TSS region	transcription start site region 119920
Tssr119921	13	55210924 to 55210958	34	+	TSS region	transcription start site region 119921
Tssr122679	13	55211354 to 55211370	16	-	TSS region	transcription start site region 122679
Tssr119922	13	55211519 to 55211561	42	+	TSS region	transcription start site region 119922
Tssr122680	13	55211543 to 55211554	11	-	TSS region	transcription start site region 122680
Tssr122681	13	55211557 to 55211571	14	-	TSS region	transcription start site region 122681
Tssr119923	13	55211678 to 55211730	52	+	TSS region	transcription start site region 119923
Tssr119924	13	55211785 to 55211861	76	+	TSS region	transcription start site region 119924
Tssr119925	13	55211888 to 55211921	33	+	TSS region	transcription start site region 119925
Tssr119926	13	55212053 to 55212086	33	+	TSS region	transcription start site region 119926
Tssr119927	13	55212719 to 55212751	32	+	TSS region	transcription start site region 119927
Tssr119928	13	55220655 to 55220668	13	+	TSS region	transcription start site region 119928