Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:54739377-54846776

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gprin1 13 54736671 to 54749874 13203 - protein coding gene G protein-regulated inducer of neurite outgrowth 1
9530001D17Rik 13 54741951 to 54742331 380 unclassified gene RIKEN cDNA 9530001D17 gene
Cpgi5649 13 54748861 to 54750295 1434 CpG island CpG island 5649
Tssr122638 13 54749613 to 54749625 12 - TSS region transcription start site region 122638
Tssr122639 13 54749627 to 54749697 70 - TSS region transcription start site region 122639
Tssr122640 13 54749849 to 54749893 44 - TSS region transcription start site region 122640
Tssr122641 13 54749908 to 54749920 12 - TSS region transcription start site region 122641
Cpgi5650 13 54757950 to 54759033 1083 CpG island CpG island 5650
Sncb 13 54758860 to 54766595 7735 - protein coding gene synuclein, beta
Tssr122642 13 54759208 to 54759218 10 - TSS region transcription start site region 122642
Tssr122643 13 54759305 to 54759313 8 - TSS region transcription start site region 122643
Tssr122644 13 54759374 to 54759403 29 - TSS region transcription start site region 122644
Tssr122645 13 54759433 to 54759441 8 - TSS region transcription start site region 122645
Tssr122646 13 54759507 to 54759518 11 - TSS region transcription start site region 122646
Tssr122647 13 54759917 to 54759955 38 - TSS region transcription start site region 122647
Tssr122648 13 54762695 to 54762709 14 - TSS region transcription start site region 122648
Tssr122649 13 54762713 to 54762729 16 - TSS region transcription start site region 122649
Tssr122650 13 54762948 to 54762971 23 - TSS region transcription start site region 122650
Tssr122651 13 54765593 to 54765615 22 - TSS region transcription start site region 122651
Tssr122652 13 54765629 to 54765648 19 - TSS region transcription start site region 122652
Cpgi5651 13 54765636 to 54766710 1074 CpG island CpG island 5651
Tssr122653 13 54765704 to 54765720 16 - TSS region transcription start site region 122653
Tssr122654 13 54765848 to 54765907 59 - TSS region transcription start site region 122654
Tssr122655 13 54766500 to 54766503 3 - TSS region transcription start site region 122655
Tssr122656 13 54766553 to 54766572 19 - TSS region transcription start site region 122656
Gm16249 13 54777514 to 54783091 5577 - antisense lncRNA gene predicted gene 16249
Tssr119899 13 54783988 to 54783993 5 + TSS region transcription start site region 119899
Eif4e1b 13 54783998 to 54788459 4461 + protein coding gene eukaryotic translation initiation factor 4E family member 1B
Cpgi5652 13 54788997 to 54790131 1134 CpG island CpG island 5652
Tspan17 13 54789377 to 54796776 7399 + protein coding gene tetraspanin 17
Tssr119900 13 54789426 to 54789497 71 + TSS region transcription start site region 119900
Tssr119901 13 54789500 to 54789509 9 + TSS region transcription start site region 119901
Tssr119902 13 54789984 to 54789989 5 + TSS region transcription start site region 119902
Gm16250 13 54840649 to 54840904 255 - pseudogene predicted gene 16250